RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 HPS6Q86YV9 775 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 SYTL1Q8IYJ3 562 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 CLDN19Q8N6F1 224 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 ENDOVQ8N8Q3 282 aaKnown RBP14.38□□□□□ -0.11
CTSD-202ENST00000367196 SLC35B2Q8TB61 432 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 ELMO1Q92556 727 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 COL26A1Q96A83 441 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 DHRS4Q9BTZ2 278 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 SLC25A23Q9BV35 468 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 TSSK1BQ9BXA7 367 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 ING2Q9H160 280 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 ACTR10Q9NZ32 417 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 ASF1AQ9Y294 204 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 PCDHGB7Q9Y5F8 929 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 DOPEY2Q9Y3R5 2298 aa14.38□□□□□ -0.11
CTSD-202ENST00000367196 LRRK2Q5S007 2527 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 CCDC78A2IDD5 438 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 MROH6A6NGR9 719 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 E7EVH7 732 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 BTN3A3O00478 584 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 DDX3YO15523 660 aaKnown RBP14.37□□□□□ -0.11
CTSD-202ENST00000367196 FTCDO95954 541 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 CD63P08962 238 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 ST6GAL1P15907 406 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 NR1D1P20393 614 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 PSMA3P25788 255 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 PDHA2P29803 388 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 RORAP35398 523 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 FDFT1P37268 417 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 CDKN1CP49918 316 aaPredicted RBP14.37□□□□□ -0.11
CTSD-202ENST00000367196 RRADP55042 308 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 GDF10P55107 478 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 ABRQ12979 859 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 IL10RAQ13651 578 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 UBAP2LQ14157 1087 aaKnown RBP14.37□□□□□ -0.11
CTSD-202ENST00000367196 IGFBP7Q16270 282 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 COLEC12Q5KU26 742 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 PLEKHS1Q5SXH7 462 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 AFTPHQ6ULP2 937 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 PPP1R21Q6ZMI0 780 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 RAB43Q86YS6 212 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 TBC1D21Q8IYX1 336 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 EFCAB3Q8N7B9 438 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 OR1L3Q8NH93 324 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 OR5K2Q8NHB8 316 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 MIB2Q96AX9 1013 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 TCTN2Q96GX1 697 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 PPM1MQ96MI6 270 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 TRAPPC9Q96Q05 1148 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 RUFY1Q96T51 708 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 AKIRIN1Q9H9L7 192 aaPredicted RBP14.37□□□□□ -0.11
CTSD-202ENST00000367196 PCMTD2Q9NV79 361 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 OR6C2Q9NZP2 312 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 IMPACTQ9P2X3 320 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 TCFL5Q9UL49 500 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 PACSIN2Q9UNF0 486 aaPredicted RBP14.37□□□□□ -0.11
CTSD-202ENST00000367196 AP1M2Q9Y6Q5 423 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 MAST4O15021 2626 aa14.37□□□□□ -0.11
CTSD-202ENST00000367196 ARGFXA6NJG6 315 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 DNAJB5O75953 348 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 RPN2P04844 631 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 CD97P48960 835 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 PRKG2Q13237 762 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 NCF4Q15080 339 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 AARS2Q5JTZ9 985 aaKnown RBP14.36□□□□□ -0.11
CTSD-202ENST00000367196 MED25Q71SY5 747 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 NLRP9Q7RTR0 991 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 PIANPQ8IYJ0 282 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 ADGRF3Q8IZF5 1079 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 RNF10Q8N5U6 811 aaKnown RBP14.36□□□□□ -0.11
CTSD-202ENST00000367196 C19orf47Q8N9M1 422 aaKnown RBP14.36□□□□□ -0.11
CTSD-202ENST00000367196 TMEM102Q8N9M5 508 aaPredicted RBP14.36□□□□□ -0.11
CTSD-202ENST00000367196 SLC38A9Q8NBW4 561 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 PHC3Q8NDX5 983 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 PEX13Q92968 403 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 HES6Q96HZ4 224 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 IP6K3Q96PC2 410 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 TRIM55Q9BYV6 548 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 TSGA10Q9BZW7 698 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 CHRNA10Q9GZZ6 450 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 PIH1D1Q9NWS0 290 aaKnown RBP14.36□□□□□ -0.11
CTSD-202ENST00000367196 RIMKLBQ9ULI2 386 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 ZNF451Q9Y4E5 1061 aa14.36□□□□□ -0.11
CTSD-202ENST00000367196 SPTBP11277 2137 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 FLNCQ14315 2725 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 ZNF749O43361 778 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 VPS4BO75351 444 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 TMEM63AO94886 807 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 PRSS56P0CW18 603 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 FOXN2P32314 431 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 PRAMEP78395 509 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 ZNF789Q5FWF6 425 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 PAPD7Q5XG87 772 aaKnown RBP14.35□□□□□ -0.11
CTSD-202ENST00000367196 CPZQ66K79 652 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 FAM198BQ6UWH4 519 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 FAM26EQ8N5C1 309 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 OR52K1Q8NGK4 314 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 OR5AR1Q8NGP9 310 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 PROKR1Q8TCW9 393 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 ADAMTS17Q8TE56 1095 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms