RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 DCLK1O15075 740 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 GJB3O75712 270 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 HLA-DQB2P05538 268 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 FHP07954 510 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 OR4Q2P0C623 313 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 LIPAP38571 399 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 MLLT3P42568 568 aaPredicted RBP12.48□□□□□ -0.41
VAMP1-201ENST00000361716 CRY1Q16526 586 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 CES5AQ6NT32 575 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 APOBEC3FQ8IUX4 373 aaKnown RBP12.48□□□□□ -0.41
VAMP1-201ENST00000361716 ADHFE1Q8IWW8 467 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 IL17RDQ8NFM7 739 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 FCRL2Q96LA5 508 aaPredicted RBP12.48□□□□□ -0.41
VAMP1-201ENST00000361716 NPY6RQ99463 290 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 ZFP14Q9HCL3 533 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 QPCTLQ9NXS2 382 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 GJD2Q9UKL4 321 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 RNF6Q9Y252 685 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 FFAR3O14843 346 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 GPR42O15529 346 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 BNIP3LO60238 219 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 CCNYL3P0C7X3 344 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 PCMT1P22061 227 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 EPHA2P29317 976 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 HTR3AP46098 478 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 OR3A3P47888 321 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 DGKEP52429 567 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 BEX3Q00994 111 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 ZNF267Q14586 743 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 TIGD6Q17RP2 521 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 LRRC20Q8TCA0 184 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 MTFMTQ96DP5 389 aaKnown RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 CDCA5Q96FF9 252 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 UCK2Q9BZX2 261 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 TUBB1Q9H4B7 451 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 BPIFA1Q9NP55 256 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 ABI2Q9NYB9 513 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 MARCH4Q9P2E8 410 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 CRNNQ9UBG3 495 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 HSPB11Q9Y547 144 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 KIAA1217Q5T5P2 1943 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 BTN3A1O00481 513 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 BRCC3P46736 316 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 AGTR2P50052 363 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 GEMP55040 296 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 CDKN2DP55273 166 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 PRKG2Q13237 762 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 KRR1Q13601 381 aaKnown RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 PON2Q15165 354 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 ARMCX4Q5H9R4 360 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 Q6ZPB1 254 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 OR8H1Q8NGG4 311 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 GRPEL2Q8TAA5 225 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 PTERQ96BW5 349 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 TSPAN17Q96FV3 270 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 ZNF300Q96RE9 604 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 BARD1Q99728 777 aaKnown RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 MMP27Q9H306 513 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 NMRK2Q9NPI5 230 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 OGDHLQ9ULD0 1010 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 FER1L6Q2WGJ9 1857 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 H3BUI4 141 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 HAT1O14929 419 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 AKR7A2O43488 359 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 SCO2O43819 266 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 SH3BGRLO75368 114 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 PAGE1O75459 146 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 YES1P07947 543 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 ARSDP51689 593 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 ALDH6A1Q02252 535 aaKnown RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 CHRNEQ04844 493 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 CDC20Q12834 499 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 MED22Q15528 200 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 NKG7Q16617 165 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 LRRC26Q2I0M4 334 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 PKDCCQ504Y2 493 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 RGMBQ6NW40 437 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 CYP4Z1Q86W10 505 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 FBXO39Q8N4B4 442 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 UTP15Q8TED0 518 aaKnown RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 COPS4Q9BT78 406 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 NARFLQ9H6Q4 476 aa12.47□□□□□ -0.41
VAMP1-201ENST00000361716 UXTQ9UBK9 157 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-201ENST00000361716 SERPINA1P01009 418 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 VIPP01282 170 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 KRT6AP02538 564 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 KRT6BP04259 564 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 PSKH1P11801 424 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 DNAJB13P59910 316 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 DPY19L3Q6ZPD9 716 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 OR13C4Q8NGS5 318 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 BPIFB1Q8TDL5 484 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 PAAF1Q9BRP4 392 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 APOL5Q9BWW9 433 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 MKRN2Q9H000 416 aaKnown RBP12.46□□□□□ -0.41
VAMP1-201ENST00000361716 ACOT13Q9NPJ3 140 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms