RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SHROOM1Q2M3G4 852 aaPredicted RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 AARDQ4LEZ3 155 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 LRRC73Q5JTD7 316 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 DCST1Q5T197 706 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SUSD4Q5VX71 490 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 DHRS7BQ6IAN0 325 aaPredicted RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 MFSD7Q6UXD7 560 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 Q6ZSV7 163 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 HIST3H2AQ7L7L0 130 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SPRED1Q7Z699 444 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 UBE2Q1Q7Z7E8 422 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 ARHGAP24Q8N264 748 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CCNYQ8ND76 341 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SYN2Q92777 582 aaPredicted RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 HAS1Q92839 578 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 FAM81BQ96LP2 452 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 MS4A10Q96PG2 267 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 RUFY1Q96T51 708 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PIGQQ9BRB3 760 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SPXQ9BT56 116 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 HSD3B7Q9H2F3 369 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 ZCCHC4Q9H5U6 513 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 KLHL1Q9NR64 748 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 THSD1Q9NS62 852 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PARPBPQ9NWS1 579 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 ANKRD10Q9NXR5 420 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 NPAP1Q9NZP6 1156 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PTGFRNQ9P2B2 879 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 IPO11Q9UI26 975 aaKnown RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 WNT6Q9Y6F9 365 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 BIRC6Q9NR09 4857 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 UHRF1BP1LA0JNW5 1464 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 YDJCA8MPS7 323 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 MAP2K7O14733 419 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SIX3O95343 332 aaPredicted RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PRAMEF12O95522 483 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 ALPPP05187 535 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 HOXB5P09067 269 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 C8orf89P0DMQ9 161 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 ALPPL2P10696 532 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 VPREB1P12018 145 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 BDKRB2P30411 391 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 HOXA11P31270 313 aaPredicted RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 TIA1P31483 386 aaKnown RBP eCLIP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 MTCP1P56278 107 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 KIAA1024LP59773 190 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 HTD2P86397 168 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 RUNX1T1Q06455 604 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CTTNQ14247 550 aaKnown RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CEP78Q5JTW2 689 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 STXBP5Q5T5C0 1151 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PAPD7Q5XG87 772 aaKnown RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SIGIRRQ6IA17 410 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 LCN10Q6JVE6 187 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 RNF207Q6ZRF8 634 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 DGLUCYQ7Z3D6 616 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM151BQ8IW70 566 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF34Q8IZ26 560 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 RTL3Q8N8U3 475 aaKnown RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SMRP1Q8NCR6 262 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 LINC00476Q8WZB0 136 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 C5orf30Q96GV9 206 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 FAM111AQ96PZ2 611 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 FEVQ99581 238 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SH3GL2Q99962 352 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SLX1AQ9BQ83 275 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 INPP5KQ9BT40 448 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CCSER1Q9C0I3 900 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CARD9Q9H257 536 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SRD5A3Q9H8P0 318 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PELI2Q9HAT8 420 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CHRNA9Q9UGM1 479 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CDH7Q9ULB5 785 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 ABCC2Q92887 1545 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 LOC100509620A0A075B734 347 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 TRBV5-3A0A0A0MS03 114 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 C5orf60A6NFR6 353 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 BECN2A8MW95 431 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 H7C1Q1 480 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 STX6O43752 255 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 SSX4O60224 188 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 PNPP00491 289 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 GH1P01241 217 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 ITGB3P05106 788 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 CHRM5P08912 532 aaPredicted RBP1.59□□□□□ -2.16
BRCA1-202ENST00000354071 LINGO3P0C6S8 592 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 ETS1P14921 441 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 MPGP29372 298 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 AVPR1AP37288 418 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 CDH12P55289 794 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 ISL1P61371 349 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 TFAP4Q01664 338 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 TNK1Q13470 666 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 USH1GQ495M9 461 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 MCMDC2Q4G0Z9 681 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 EPC2Q52LR7 807 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 DPY19L2P1Q6NXN4 242 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 OLFM4Q6UX06 510 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 ARHGEF25Q86VW2 580 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 TMPRSS12Q86WS5 348 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms