RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TBATAQ96M53 351 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 ADAM2Q99965 735 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 NUAK2Q9H093 628 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 ENTPD7Q9NQZ7 604 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 FNIP2Q9P278 1114 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 BTBD3Q9Y2F9 522 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 PCDHGB1Q9Y5G3 927 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 PCDHA11Q9Y5I1 949 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 PSAT1Q9Y617 370 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 SLC1A7O00341 560 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 MRASO14807 208 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 NCAM2O15394 837 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 SH3BP5O60239 455 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 SOAT2O75908 522 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 SNX4O95219 450 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 MT-ND1P03886 318 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ITGB1P05556 798 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 C2P06681 752 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ADORA3P0DMS8 318 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ITGB6P18564 788 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 KELP23276 732 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 NR2C2P49116 596 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 GZMKP49863 264 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ERVK-21P61565 698 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ROR1Q01973 937 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 SEMA3BQ13214 749 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 IRF3Q14653 427 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ACOX1Q15067 660 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ZBTB37Q5TC79 503 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 LCN8Q6JVE9 175 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 LIPIQ6XZB0 460 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ZNF534Q76KX8 674 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 BEND5Q7L4P6 421 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 RBM23Q86U06 439 aaKnown RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 PM20D2Q8IYS1 436 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 MICU2Q8IYU8 434 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 MFSD3Q96ES6 412 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 LRCH3Q96II8 777 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 OR2A14Q96R47 310 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 EBNA1BP2Q99848 306 aaKnown RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 SEC22CQ9BRL7 303 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 DCSTAMPQ9H295 470 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 INTS6Q9UL03 887 aaKnown RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 MRPS7Q9Y2R9 242 aaKnown RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 PRR23AA6NEV1 266 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 APOL1O14791 398 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 KCNN4O15554 427 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 B3GAT3O94766 335 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 TCF3P15923 654 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 PCSK2P16519 638 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 CYP2F1P24903 491 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 MAGEA3P43357 314 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 GNPDA1P46926 289 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 RPL34P49207 117 aaKnown RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 SULT1E1P49888 294 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 TKTL1P51854 596 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 BCAR1P56945 870 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 S100A12P80511 92 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 CD47Q08722 323 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 UPP1Q16831 310 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ARL13AQ5H913 290 aaPredicted RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 OTUD1Q5VV17 481 aaPredicted RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 CMC1Q7Z7K0 106 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ZNF557Q8N988 423 aaPredicted RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 RORBQ92753 470 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 KCTD15Q96SI1 283 aaPredicted RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 DNAI2Q9GZS0 605 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 PPA2Q9H2U2 334 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 ZBTB20Q9HC78 741 aaPredicted RBP11.64□□□□□ -0.55
RTN3-203ENST00000341307 HSPE1-MOB4S4R3N1 261 aa11.64□□□□□ -0.55
RTN3-203ENST00000341307 OR2B3O76000 313 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 FCGR1AP12314 374 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 GOT1P17174 413 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 PRIM2P49643 509 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 ARSFP54793 590 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 SNX16P57768 344 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 TRAF3Q13114 568 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 CFAP77Q6ZQR2 320 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 TMEM199Q8N511 208 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 OR10T2Q8NGX3 314 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 CENPIQ92674 756 aaPredicted RBP11.63□□□□□ -0.55
RTN3-203ENST00000341307 SMOQ99835 787 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 NXF2Q9GZY0 626 aaKnown RBP11.63□□□□□ -0.55
RTN3-203ENST00000341307 LRRC4Q9HBW1 653 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 CCDC167Q9P0B6 97 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 DPP7Q9UHL4 492 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 CYB5R1Q9UHQ9 305 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 TRAV6A0A075B6T7 132 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 E5RI56 91 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 SDHDO14521 159 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 MDM4O15151 490 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 THRBP10828 461 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 TNNI3P19429 210 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 TYK2P29597 1187 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 MATKP42679 507 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 CLK1P49759 484 aaKnown RBP11.63□□□□□ -0.55
RTN3-203ENST00000341307 YBX1P67809 324 aaKnown RBP11.63□□□□□ -0.55
RTN3-203ENST00000341307 DGCR6Q14129 220 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 TFDP2Q14188 446 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms