RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 HLCSP50747 726 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 FOXA1P55317 472 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 IL2P60568 153 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 ADARB1P78563 741 aaKnown RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 CSTF1Q05048 431 aaKnown RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 LIPEQ05469 1076 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 TUBA3CQ13748 450 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 DDR2Q16832 855 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 GEN1Q17RS7 908 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 VPS26BQ4G0F5 336 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 INO80DQ53TQ3 878 aaPredicted RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 CYP2R1Q6VVX0 501 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 LINC00299Q6ZSB3 139 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 GAREM2Q75VX8 874 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 LPCAT2Q7L5N7 544 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 DNAJB7Q7Z6W7 309 aaPredicted RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 SYVN1Q86TM6 617 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 LDB1Q86U70 411 aaPredicted RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 RIMKLAQ8IXN7 391 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 FAM9CQ8IZT9 166 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 MYO1HQ8N1T3 1032 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 CBR4Q8N4T8 237 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 DHRSXQ8N5I4 330 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.59□□□□□ -0.71
RTN3-201ENST00000338850 B4GALNT2Q8NHY0 566 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 PPP3R2Q96LZ3 170 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 GPR21Q99679 349 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 KCTD14Q9BQ13 255 aaPredicted RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 P2RY12Q9H244 342 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 SEMA6AQ9H2E6 1030 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 MAGEE1Q9HCI5 957 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 PALMDQ9NP74 551 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 TBCCD1Q9NVR7 557 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 NDRG2Q9UN36 371 aaKnown RBP10.59□□□□□ -0.71
RTN3-201ENST00000338850 PIAS3Q9Y6X2 628 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 OBSL1O75147 1896 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 DMDP11532 3685 aa10.59□□□□□ -0.71
RTN3-201ENST00000338850 CACNA1AO00555 2505 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ATP6AP2A0A1C7CYW4 349 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ANKRD28O15084 1053 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 FZD6O60353 706 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ATP6AP2O75787 350 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 FGF19O95750 216 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ACPPP15309 386 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 CKMT2P17540 419 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ATF6P18850 670 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ATP5C1P36542 298 aaKnown RBP10.58□□□□□ -0.72
RTN3-201ENST00000338850 PPP3CCP48454 512 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 PIK3CGP48736 1102 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 GPR15P49685 360 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 EMP3P54852 163 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 GABARAPL2P60520 117 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 CACNG1Q06432 222 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 FCHO2Q0JRZ9 810 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 GALNT3Q14435 633 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 MYBPC3Q14896 1274 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 CYTH1Q15438 398 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 TSNQ15631 228 aaKnown RBP10.58□□□□□ -0.72
RTN3-201ENST00000338850 PTPRNQ16849 979 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ATP6AP1LQ52LC2 224 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 CTSL3PQ5NE16 218 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 C6orf136Q5SQH8 315 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 CCNYL2Q5T2Q4 361 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 LYPLAL1Q5VWZ2 237 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 TTC33Q6PID6 262 aaPredicted RBP10.58□□□□□ -0.72
RTN3-201ENST00000338850 LAYNQ6UX15 382 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 RPS27LQ71UM5 84 aaKnown RBP10.58□□□□□ -0.72
RTN3-201ENST00000338850 KDELC2Q7Z4H8 507 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ITIH5Q86UX2 942 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 GPR180Q86V85 440 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 GPSM1Q86YR5 675 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 KIAA2013Q8IYS2 634 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 LGI2Q8N0V4 545 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 SUMF1Q8NBK3 374 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ZBTB44Q8NCP5 570 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 OR4K2Q8NGD2 314 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 NELL1Q92832 810 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 TBC1D20Q96BZ9 403 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 NSMCE2Q96MF7 247 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 NSUN5Q96P11 429 aaKnown RBP10.58□□□□□ -0.72
RTN3-201ENST00000338850 SEPT5Q99719 369 aaPredicted RBP10.58□□□□□ -0.72
RTN3-201ENST00000338850 BCL7BQ9BQE9 202 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 HGH1Q9BTY7 390 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 CHRDQ9H2X0 955 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 MAGIXQ9H6Y5 334 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 GORASP2Q9H8Y8 452 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 SCUBE2Q9NQ36 999 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 PRMT8Q9NR22 394 aaPredicted RBP10.58□□□□□ -0.72
RTN3-201ENST00000338850 LATS2Q9NRM7 1088 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 USE1Q9NZ43 259 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 ZNF225Q9UK10 706 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 NUDT5Q9UKK9 219 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 AGO1Q9UL18 857 aaKnown RBP10.58□□□□□ -0.72
RTN3-201ENST00000338850 DHRS7Q9Y394 339 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 PCDHGA2Q9Y5H1 932 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 SPO11Q9Y5K1 396 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 FANCMQ8IYD8 2048 aa10.58□□□□□ -0.72
RTN3-201ENST00000338850 CROCCQ5TZA2 2017 aa10.57□□□□□ -0.72
RTN3-201ENST00000338850 UBA6A0AVT1 1052 aaPredicted RBP10.57□□□□□ -0.72
RTN3-201ENST00000338850 NPEPPSL1A6NEC2 478 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms