RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 LCN9Q8WX39 176 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 INPP5DQ92835 1189 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 GRAMD1AQ96CP6 724 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 TAS2R13Q9NYV9 303 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 NINJ2Q9NZG7 142 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 POLG2Q9UHN1 485 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 CORO1CQ9ULV4 474 aaPredicted RBP15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 DHRS7Q9Y394 339 aa15.46■□□□□ 0.07
CCDC28A-201ENST00000332797 OR6C74A6NCV1 312 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 FAM159BA6NKW6 160 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 RPN2P04844 631 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 THRAP10827 490 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 KBTBD12Q3ZCT8 623 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 C3orf38Q5JPI3 329 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 HECTD2Q5U5R9 776 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 FAM45BPQ6NSW5 357 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 UGT3A1Q6NUS8 523 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 IRGCQ6NXR0 463 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 CYS1Q717R9 158 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 OOSP2Q86WS3 158 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 PLXDC1Q8IUK5 500 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 CTAGE3PQ8IX95 158 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 CPNE9Q8IYJ1 553 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 OR4E2Q8NGC2 313 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 FAM45AQ8TCE6 357 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 LIN37Q96GY3 246 aaPredicted RBP15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 ELMO2Q96JJ3 720 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 FOPNLQ96NB1 174 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 TGM7Q96PF1 710 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 NRTNQ99748 197 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 CDC42EP4Q9H3Q1 356 aaKnown RBP15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 SRMSQ9H3Y6 488 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 XKR8Q9H6D3 395 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 TXNDC16Q9P2K2 825 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 KLHL42Q9P2K6 505 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 PLAGL1Q9UM63 463 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 NFS1Q9Y697 457 aa15.46■□□□□ 0.06
CCDC28A-201ENST00000332797 UNC13CQ8NB66 2214 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 CCDC187A0A096LP49 1063 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 OR5K3A6NET4 321 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 TRABD2BA6NFA1 517 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 A8MU76 341 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 CAPN5O15484 640 aaPredicted RBP15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 C1QAP02745 245 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 SAT1P21673 171 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 MCM3P25205 808 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 PHBP35232 272 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 BDKRB1P46663 353 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 TIAL1Q01085 375 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 EFTUD2Q15029 972 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 KLHL38Q2WGJ6 581 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 UBAP2Q5T6F2 1119 aaKnown RBP15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 ARMC6Q6NXE6 501 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 FOXR1Q6PIV2 292 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 ZC3HC1Q86WB0 502 aaKnown RBP15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 RELL1Q8IUW5 271 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 DCUN1D3Q8IWE4 304 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 PPM1NQ8N819 430 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 TFB2MQ9H5Q4 396 aaKnown RBP15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 HRASLS2Q9NWW9 162 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 CIDEBQ9UHD4 219 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 SATB2Q9UPW6 733 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 ICKQ9UPZ9 632 aa15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 MN1Q10571 1320 aaPredicted RBP15.45■□□□□ 0.06
CCDC28A-201ENST00000332797 FAM95CA0A1B0GW59 222 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 KDM1AO60341 852 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 SLU7O95391 586 aaKnown RBP15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 ACSL3O95573 720 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 MPOP05164 745 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 POLR2CP19387 275 aaPredicted RBP15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 FDXRP22570 491 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 SKIV2L2P42285 1042 aaKnown RBP15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 PGGT1BP53609 377 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 PPP1CAP62136 330 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 GABREP78334 506 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 PDAP1Q13442 181 aaKnown RBP15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 TRA2AQ13595 282 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 C16orf72Q14CZ0 275 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 TTC23LQ6PF05 361 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 FAM92BQ6ZTR7 304 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 RAB11FIP2Q7L804 512 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 AMIGO1Q86WK6 493 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 GSPT2Q8IYD1 628 aaKnown RBP15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 WDR36Q8NI36 951 aaKnown RBP15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 GATA6Q92908 595 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 NXPE2Q96DL1 559 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 ZDHHC12Q96GR4 267 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 VPS39Q96JC1 886 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 OLFM1Q99784 485 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 CPNE1Q99829 537 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 NRSN2Q9GZP1 204 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 RHOJQ9H4E5 214 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 VWA7Q9Y334 891 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 LOXL2Q9Y4K0 774 aa15.44■□□□□ 0.06
CCDC28A-201ENST00000332797 A0A1W2PNU3 283 aaPredicted RBP15.43■□□□□ 0.06
CCDC28A-201ENST00000332797 GSAPA4D1B5 854 aa15.43■□□□□ 0.06
CCDC28A-201ENST00000332797 PMS2P1A4D2B8 440 aa15.43■□□□□ 0.06
CCDC28A-201ENST00000332797 BTN3A1O00481 513 aa15.43■□□□□ 0.06
CCDC28A-201ENST00000332797 RASSF9O75901 435 aa15.43■□□□□ 0.06
CCDC28A-201ENST00000332797 C9P02748 559 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms