RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SETD6Q8TBK2 473 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 UTP15Q8TED0 518 aaKnown RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 ATG4CQ96DT6 458 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 CCDC32Q9BV29 185 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SHARPINQ9H0F6 387 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 TTYH1Q9H313 450 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 ESRP2Q9H6T0 727 aaKnown RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SMURF2Q9HAU4 748 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 PFDN2Q9UHV9 154 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 CYTH4Q9UIA0 394 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 KLHL21Q9UJP4 597 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 MKL2Q9ULH7 1088 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SPATA2Q9UM82 520 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 CSADQ9Y600 493 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 POLR2AP24928 1970 aaKnown RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SH3D21A4FU49 640 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 HNRNPCL2B2RXH8 293 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SDHDO14521 159 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 AIREO43918 545 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 CNTN5O94779 1100 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 CSF2P04141 144 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 ALPPP05187 535 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 GPIP06744 558 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 CPB1P15086 417 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 PGAM1P18669 254 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 GRIA4P48058 902 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 DAB2P98082 770 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 IRF9Q00978 393 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 GRIK4Q16099 956 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 FSCN1Q16658 493 aaKnown RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 ZMAT1Q5H9K5 638 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 TTC23Q5W5X9 447 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 TIGD3Q6B0B8 471 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SNX20Q7Z614 316 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 PELI3Q8N2H9 469 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 ARL6IP6Q8N6S5 226 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 PQLC3Q8N755 202 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 DNERQ8NFT8 737 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 OR4D10Q8NGI6 311 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 RDH11Q8TC12 318 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 FRS2Q8WU20 508 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 SMG7Q92540 1137 aaKnown RBP11.64□□□□□ -0.55
SHMT2-201ENST00000328923 PDXPQ96GD0 296 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 ATXN7L3BQ96GX2 97 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 TAAR1Q96RJ0 339 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 PPP1R16BQ96T49 567 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 MTMR10Q9NXD2 777 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 TRHDEQ9UKU6 1024 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 TLR6Q9Y2C9 796 aa11.64□□□□□ -0.55
SHMT2-201ENST00000328923 B4DXG7 233 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 NOBOXO60393 691 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 DDNO94850 711 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 METTL18O95568 372 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 MT-ND2P03891 347 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 LCKP06239 509 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 APOA4P06727 396 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 FABP1P07148 127 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 RRASP10301 218 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 AZGP1P25311 298 aaKnown RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 FMO3P31513 532 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 GDI2P50395 445 aaKnown RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 HMGCS2P54868 508 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 HOXC5Q00444 222 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 FADDQ13158 208 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 CAPRIN1Q14444 709 aaKnown RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 PGM5Q15124 567 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 BAK1Q16611 211 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 HKDC1Q2TB90 917 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 SOWAHCQ53LP3 525 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 ARHGAP36Q6ZRI8 547 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 TRILQ7L0X0 811 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 CCDC190Q86UF4 302 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 KRT73Q86Y46 540 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 RASAL3Q86YV0 1011 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 TMBIM1Q969X1 311 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 C12orf42Q96LP6 360 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 CPNE1Q99829 537 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 RACGAP1Q9H0H5 632 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 EIF2B3Q9NR50 452 aaKnown RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 FIS1Q9Y3D6 152 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 PPP2R3BQ9Y5P8 575 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 LYVE1Q9Y5Y7 322 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 SSC5DA1L4H1 1573 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 DOCK5Q9H7D0 1870 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 A0A0A6YYJ9 748 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 PNMA8CA0A1B0GUJ8 204 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 TCRBV5S2A0A599 114 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 PRMT5O14744 637 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-201ENST00000328923 PRPSAP2O60256 369 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 ALDH1A1P00352 501 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 MPOP05164 745 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 GPD1P21695 349 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 CA5AP35218 305 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 ARFIP1P53367 373 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 FCGRTP55899 365 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 ISL1P61371 349 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 HYAL2Q12891 473 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 ORC1Q13415 861 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 GRB7Q14451 532 aa11.63□□□□□ -0.55
SHMT2-201ENST00000328923 MPP7Q5T2T1 576 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms