RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 NFE2L1Q14494 772 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 PTCHD3Q3KNS1 767 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 NEK5Q6P3R8 708 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 LMNTD1Q8N9Z9 388 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 TP53I13Q8NBR0 393 aaPredicted RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 SPDYE1Q8NFV5 336 aaPredicted RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 PHF7Q9BWX1 381 aaPredicted RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 C8orf33Q9H7E9 229 aaPredicted RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 FZD3Q9NPG1 666 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 RNF11Q9Y3C5 154 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 A0A1W2PQU0 124 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 PRAMEF4O60810 478 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 POP7O75817 140 aaKnown RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 DNTTP04053 509 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 ENO2P09104 434 aaPredicted RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 GSTM1P09488 218 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 GGT5P36269 586 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 PKNOX1P55347 436 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 PPP2CBP62714 309 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 PPP2CAP67775 309 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 GSTM4Q03013 218 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 TFF2Q03403 129 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 SNCBQ16143 134 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 TMEM259Q4ZIN3 620 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 XKR7Q5GH72 579 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 PRAMEF9Q5VWM5 478 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 GK5Q6ZS86 529 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 METTL6Q8TCB7 284 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 ATP6V1E2Q96A05 226 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 TUBGCP3Q96CW5 907 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 CMTM5Q96DZ9 223 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 MRGPRX1Q96LB2 322 aa17.98■□□□□ 0.47
USP39-201ENST00000323701 FARSBQ9NSD9 589 aaKnown RBP17.98■□□□□ 0.47
USP39-201ENST00000323701 LOC730098B7Z3J9 87 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 FFAR3O14843 346 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 GPR42O15529 346 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 PEX11AO75192 247 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 ITPKAP23677 461 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 SLC6A12P48065 614 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 CCNG1P51959 295 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 NAA20P61599 178 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 CDKL1Q00532 357 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 SP140Q13342 867 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 ABRAXAS2Q15018 415 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 Q6ZSR9 355 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 MILR1Q7Z6M3 343 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 DNASE1L2Q92874 299 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 MYOCQ99972 504 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 C1QTNF2Q9BXJ5 285 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 ZCCHC2Q9C0B9 1178 aaKnown RBP17.97■□□□□ 0.47
USP39-201ENST00000323701 OTCP00480 354 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 DIO3P55073 304 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 NME5P56597 212 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 MXRA7P84157 204 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 PTK2BQ14289 1009 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 AGERQ15109 404 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 KIRREL3Q8IZU9 778 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 MCOLN3Q8TDD5 553 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 KCNV2Q8TDN2 545 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 SIPA1Q96FS4 1042 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 SLC22A14Q9Y267 594 aa17.97■□□□□ 0.47
USP39-201ENST00000323701 C9JVG2 144 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 GIPC1O14908 333 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 CHUKO15111 745 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 SLC16A5O15375 505 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 RNGTTO60942 597 aaKnown RBP17.96■□□□□ 0.47
USP39-201ENST00000323701 HIST1H2AGP0C0S8 130 aaPredicted RBP17.96■□□□□ 0.47
USP39-201ENST00000323701 PRR35P0CG20 571 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 HGFP14210 728 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 NDUFV2P19404 249 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 HIST1H2ADP20671 130 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 ITGAXP20702 1163 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 CYP2A7P20853 494 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 CUL3Q13618 768 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 PAOXQ6QHF9 649 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 Q6ZS52 159 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 HIST1H2AHQ96KK5 128 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 RAB3IPQ96QF0 476 aaPredicted RBP17.96■□□□□ 0.47
USP39-201ENST00000323701 HIST1H2AJQ99878 128 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 H2AFJQ9BTM1 129 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 NUSAP1Q9BXS6 441 aaKnown RBP17.96■□□□□ 0.47
USP39-201ENST00000323701 TEX101Q9BY14 249 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 SLC32A1Q9H598 525 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 ANGPTL3Q9Y5C1 460 aa17.96■□□□□ 0.47
USP39-201ENST00000323701 H3BM21 787 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 VEGFDO43915 354 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 SORBS2O94875 1100 aaKnown RBP17.96■□□□□ 0.46
USP39-201ENST00000323701 WDR47O94967 919 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 EPB42P16452 691 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 PRDX6P30041 224 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 TRIM23P36406 574 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 PGM1P36871 562 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 RGS19P49795 217 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 PFN3P60673 137 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 CDKL4Q5MAI5 379 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 EFCAB3Q8N7B9 438 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 PPFIBP2Q8ND30 876 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 LINC00615Q96LM1 132 aaPredicted RBP17.96■□□□□ 0.46
USP39-201ENST00000323701 NRTNQ99748 197 aa17.96■□□□□ 0.46
USP39-201ENST00000323701 SLC17A9Q9BYT1 436 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms