RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 C2orf49Q9BVC5 232 aaPredicted RBP23.59■■□□□ 1.37
FOXA3-201ENST00000302177 MAGIXQ9H6Y5 334 aa23.59■■□□□ 1.37
FOXA3-201ENST00000302177 LRTM1Q9HBL6 345 aa23.59■■□□□ 1.37
FOXA3-201ENST00000302177 HPS4Q9NQG7 708 aa23.59■■□□□ 1.37
FOXA3-201ENST00000302177 ADGRE2Q9UHX3 823 aa23.59■■□□□ 1.37
FOXA3-201ENST00000302177 PRSS21Q9Y6M0 314 aa23.59■■□□□ 1.37
FOXA3-201ENST00000302177 CROCCQ5TZA2 2017 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 TRIM16O95361 564 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 PGRP06401 933 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 RETP07949 1114 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 MBL2P11226 248 aaPredicted RBP23.58■■□□□ 1.37
FOXA3-201ENST00000302177 TMBIM6P55061 237 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 SMAD3P84022 425 aaKnown RBP23.58■■□□□ 1.37
FOXA3-201ENST00000302177 VEPH1Q14D04 833 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 PHKG1Q16816 387 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 FAM174BQ3ZCQ3 159 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 LHX8Q68G74 356 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 GRAMD4Q6IC98 578 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 FAM117BQ6P1L5 589 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 METTL3Q86U44 580 aaKnown RBP23.58■■□□□ 1.37
FOXA3-201ENST00000302177 PJA1Q8NG27 643 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 LKAAEAR1Q8TD35 194 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 ACDQ96AP0 544 aa23.58■■□□□ 1.37
FOXA3-201ENST00000302177 SOX17Q9H6I2 414 aaPredicted RBP23.58■■□□□ 1.37
FOXA3-201ENST00000302177 ZNF490Q9ULM2 529 aaPredicted RBP23.58■■□□□ 1.37
FOXA3-201ENST00000302177 GLYATL1P3A0A0U1RQE8 302 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 C1orf232A0A0U1RR37 186 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 AGAP14A8MT82 685 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 MANBAO00462 879 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 PTGR1Q14914 329 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 BROXQ5VW32 411 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 GPR107Q5VW38 600 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 OR13F1Q8NGS4 319 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 OR10A6Q8NH74 314 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 FIG4Q92562 907 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 ABHD8Q96I13 439 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 OSBPL10Q9BXB5 764 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 C1orf109Q9NX04 203 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.58■■□□□ 1.36
FOXA3-201ENST00000302177 FAF1Q9UNN5 650 aaPredicted RBP23.58■■□□□ 1.36
FOXA3-201ENST00000302177 YIPF1Q9Y548 306 aa23.58■■□□□ 1.36
FOXA3-201ENST00000302177 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.57■■□□□ 1.36
FOXA3-201ENST00000302177 C16orf96A6NNT2 1141 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 ERN1O75460 977 aaKnown RBP23.57■■□□□ 1.36
FOXA3-201ENST00000302177 ATE1O95260 518 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 PLD1Q13393 1074 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 CDH18Q13634 790 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 IMPG1Q17R60 797 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 USP39Q53GS9 565 aaKnown RBP23.57■■□□□ 1.36
FOXA3-201ENST00000302177 KIAA1841Q6NSI8 718 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 FAM217AQ8IXS0 508 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 C8orf59Q8N0T1 100 aaPredicted RBP23.57■■□□□ 1.36
FOXA3-201ENST00000302177 LIX1Q8N485 282 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 HDAC2Q92769 488 aaKnown RBP23.57■■□□□ 1.36
FOXA3-201ENST00000302177 ING2Q9H160 280 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 KLQ9UEF7 1012 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 CRLS1Q9UJA2 301 aa23.57■■□□□ 1.36
FOXA3-201ENST00000302177 TRBV5-3A0A0A0MS03 114 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 EIF3FO00303 357 aaPredicted RBP23.56■■□□□ 1.36
FOXA3-201ENST00000302177 PITPNM1O00562 1244 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 GREM1O60565 184 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 SEC22BO75396 215 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 KRT6AP02538 564 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 KRT6BP04259 564 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 BPIP17213 487 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 SPAM1P38567 509 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 NRIP1P48552 1158 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 KRT6CP48668 564 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 AAK1Q2M2I8 961 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 Q6ZNB5 142 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 PLPP6Q8IY26 295 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 RGL4Q8IZJ4 473 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 CLDN19Q8N6F1 224 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 PXYLP1Q8TE99 480 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 ULK4Q96C45 1275 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 NRBF2Q96F24 287 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 CCDC97Q96F63 343 aaPredicted RBP23.56■■□□□ 1.36
FOXA3-201ENST00000302177 RBM4BQ9BQ04 359 aaKnown RBP23.56■■□□□ 1.36
FOXA3-201ENST00000302177 RBM4Q9BWF3 364 aaKnown RBP23.56■■□□□ 1.36
FOXA3-201ENST00000302177 APOL5Q9BWW9 433 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 SLC25A37Q9NYZ2 338 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 LIMD1Q9UGP4 676 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 LOC730098B7Z3J9 87 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 CXCR6O00574 342 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 STK16O75716 305 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 CST1P01037 141 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 TCF3P15923 654 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 ITGB6P18564 788 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 CA5AP35218 305 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 HNF1BP35680 557 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 HNRNPFP52597 415 aaKnown RBP23.56■■□□□ 1.36
FOXA3-201ENST00000302177 PRMT2P55345 433 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 PPP2R2BQ00005 443 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 SPANXN4Q5MJ08 99 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 LRIF1Q5T3J3 769 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 GPR149Q86SP6 731 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 ITIH5Q86UX2 942 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 MSRB3Q8IXL7 192 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 MICU2Q8IYU8 434 aa23.56■■□□□ 1.36
FOXA3-201ENST00000302177 NXPE1Q8N323 547 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms