RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 EPYCQ99645 322 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 RAB11FIP5Q9BXF6 653 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 UCK2Q9BZX2 261 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TM9SF3Q9HD45 589 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 COMMD3Q9UBI1 195 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 NOP16Q9Y3C1 178 aaKnown RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ISPDA4D126 451 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SSX5O60225 188 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 GSTM3P21266 225 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 GNA12Q03113 381 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 PLEKHN1Q494U1 663 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CERS6Q6ZMG9 384 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SYNPOQ8N3V7 929 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 GLB1L3Q8NCI6 653 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 C9orf43Q8TAL5 461 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TCEAL4Q96EI5 215 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ALKBH4Q9NXW9 302 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF226Q9NYT6 803 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CEMIPQ8WUJ3 1361 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ARPC4-TTLL3A0A0A6YYG9 625 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 NEDD8-MDP1E9PL57 170 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CSN2P05814 226 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 C15orf59Q2T9L4 293 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ATAT1Q5SQI0 421 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 PPP1R26Q5T8A7 1209 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 DNAAF5Q86Y56 855 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 C7orf61Q8IZ16 206 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ANKRD52Q8NB46 1076 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ASB12Q8WXK4 309 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SLC35C1Q96A29 364 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 BORCS7Q96B45 105 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 WASF2Q9Y6W5 498 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 KIAA0100Q14667 2235 aaKnown RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 MAGEB17A8MXT2 336 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CCNFP41002 786 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SOX10P56693 466 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 PPP4CP60510 307 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TROAPQ12815 778 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SMARCB1Q12824 385 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 IFI44LQ53G44 452 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ZYG11AQ6WRX3 759 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SLC35G5Q96KT7 338 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 PCDHB18PQ96TA0 734 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 RGCCQ9H4X1 137 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 AGO3Q9H9G7 860 aaKnown RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 PADI2Q9Y2J8 665 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 BCORL1Q5H9F3 1711 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 MYH14Q7Z406 1995 aaKnown RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CLTCQ00610 1675 aaKnown RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CTDNEP1O95476 244 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TCEA1P23193 301 aaKnown RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CTBP1Q13363 440 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 INAVAQ3KP66 663 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 PLEKHG6Q3KR16 790 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SLC16A9Q7RTY1 509 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 FAM124AQ86V42 546 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TTLQ8NG68 377 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TREX2Q9BQ50 279 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SNRNP25Q9BV90 132 aaKnown RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ALKQ9UM73 1620 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 MSCO60682 206 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 HCKP08631 526 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 HOXB9P17482 250 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ICAM3P32942 547 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 GPR158Q5T848 1215 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF550Q7Z398 422 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 C12orf50Q8NA57 414 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 KCNN1Q92952 543 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 GAD1Q99259 594 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 PORCNQ9H237 461 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CYP3A7-CYP3A51PA0A087WV96 503 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 NPIPA5E9PKD4 350 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CPN2P22792 545 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CYP3A7P24462 503 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 MPSTP25325 297 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 MATKP42679 507 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 E2F1Q01094 437 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 C2orf80Q0P641 193 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 MADCAM1Q13477 382 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 GNMTQ14749 295 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 VWA5B1Q5TIE3 1220 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF34Q8IZ26 560 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 SYT4Q9H2B2 425 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 OR51V1Q9H2C8 321 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D14Q9P2M4 693 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 NPIPA1Q9UND3 350 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 HPSEQ9Y251 543 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 C5orf60A6NFR6 353 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 MANSC4A6NHS7 340 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 PCDHGA12O60330 932 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 AGR2O95994 175 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ITGA5P08648 1049 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CSTF2P33240 577 aaKnown RBP eCLIP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 SEMA5AQ13591 1074 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ABRAXAS2Q15018 415 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 OGFOD2Q6N063 350 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 BORAQ6PGQ7 559 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF101Q8IZC7 436 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CXCR6O00574 342 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CLDN11O75508 207 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms