RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 SIPA1Q96FS4 1042 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 RIPK3Q9Y572 518 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 MBD5Q9P267 1494 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 CDH4P55283 916 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 GNA12Q03113 381 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 OGFRL1Q5TC84 451 aaPredicted RBP20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 ANKRD23Q86SG2 305 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 METTL8Q9H825 291 aaKnown RBP20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 BRMS1LQ5PSV4 323 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 IL22RA1Q8N6P7 574 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 MGME1Q9BQP7 344 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 CHST10O43529 356 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 MAP3K8P41279 467 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 CERS5Q8N5B7 392 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 CAVIN3Q969G5 261 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 ZNF184Q99676 751 aaPredicted RBP20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 LGR4Q9BXB1 951 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 UCKL1Q9NWZ5 548 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 ZNF639Q9UID6 485 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 TMEM5Q9Y2B1 443 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 HEBP2Q9Y5Z4 205 aa20.02■□□□□ 0.8
CACNA1B-201ENST00000277549 S100A1P23297 94 aa20.02■□□□□ 0.79
CACNA1B-201ENST00000277549 NMBRP28336 390 aa20.02■□□□□ 0.79
CACNA1B-201ENST00000277549 ACSL1P33121 698 aa20.02■□□□□ 0.79
CACNA1B-201ENST00000277549 GRASPQ7Z6J2 395 aaPredicted RBP20.02■□□□□ 0.79
CACNA1B-201ENST00000277549 AMZ2Q86W34 360 aa20.02■□□□□ 0.79
CACNA1B-201ENST00000277549 KLHL6Q8WZ60 621 aa20.02■□□□□ 0.79
CACNA1B-201ENST00000277549 ZSWIM3Q96MP5 696 aa20.02■□□□□ 0.79
CACNA1B-201ENST00000277549 KCNS2Q9ULS6 477 aa20.02■□□□□ 0.79
CACNA1B-201ENST00000277549 C2CD2Q9Y426 696 aa20.02■□□□□ 0.79
CACNA1B-201ENST00000277549 ITGA5P08648 1049 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 HLA-EP13747 358 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 LMO2P25791 158 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 ZSCAN4Q8NAM6 433 aaPredicted RBP20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 PYCR2Q96C36 320 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 UBIAD1Q9Y5Z9 338 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 FADS2P1A8MWK0 482 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 BCKDKO14874 412 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 STK16O75716 305 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 SRCP12931 536 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 BNIP2Q12982 314 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 CPNE9Q8IYJ1 553 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 TRPV1Q8NER1 839 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 FBXL12Q9NXK8 326 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 YARS2Q9Y2Z4 477 aaKnown RBP20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 MEGF6O75095 1541 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 RB1P06400 928 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 TARDBPQ13148 414 aaKnown RBP eCLIP20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 TATDN1Q6P1N9 297 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 ZNF101Q8IZC7 436 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 AADATQ8N5Z0 425 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 GATSQ8NAP1 163 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 DBF4BQ8NFT6 615 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 THEM6Q8WUY1 208 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 GKN1Q9NS71 199 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 ATXN7L1Q9ULK2 861 aaPredicted RBP20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 PCDHA2Q9Y5H9 948 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 TCRBV21S2A2A0A5A6 115 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 NADKO95544 446 aaPredicted RBP20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 GXYLT1Q4G148 440 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 RAB11FIP2Q7L804 512 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 SH3YL1Q96HL8 342 aaPredicted RBP20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 CHCHD6Q9BRQ6 235 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 RIOK2Q9BVS4 552 aaKnown RBP20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 HSDL2Q6YN16 418 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 NET1Q7Z628 596 aaPredicted RBP20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 CPT1CQ8TCG5 803 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 MMP20O60882 483 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 SH3PXD2AQ5TCZ1 1133 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 TCAIMQ8N3R3 496 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 COQ8AQ8NI60 647 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 SCAMP5Q8TAC9 235 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 GIPC3Q8TF64 312 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 ZSCAN5AQ9BUG6 496 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 B3GAT2Q9NPZ5 323 aa20.01■□□□□ 0.79
CACNA1B-201ENST00000277549 TRPM1Q7Z4N2 1603 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 MEIS2O14770 477 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 DHX15O43143 795 aaKnown RBP20■□□□□ 0.79
CACNA1B-201ENST00000277549 C6orf52Q5T4I8 152 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 SLC39A3Q9BRY0 314 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 IPO13O94829 963 aaKnown RBP20■□□□□ 0.79
CACNA1B-201ENST00000277549 REP15Q6BDI9 236 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 KCNK6Q9Y257 313 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 PCDHB1Q9Y5F3 818 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 IFNW1P05000 195 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 CFL1P23528 166 aaKnown RBP20■□□□□ 0.79
CACNA1B-201ENST00000277549 OR12D2P58182 307 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 ENPP2Q13822 863 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 B3GNT6Q6ZMB0 384 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 CYP2U1Q7Z449 544 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 SYNPOQ8N3V7 929 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 OXR1Q8N573 874 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 ADAD1Q96M93 576 aaKnown RBP20■□□□□ 0.79
CACNA1B-201ENST00000277549 WNT6Q9Y6F9 365 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 TEX46H3BTG2 121 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 USP2O75604 605 aaPredicted RBP20■□□□□ 0.79
CACNA1B-201ENST00000277549 HCAR3P49019 387 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 STK32AQ8WU08 396 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 CASP6P55212 293 aa20■□□□□ 0.79
CACNA1B-201ENST00000277549 GTF2BQ00403 316 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms