RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PFDN1O60925 122 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 KATNA1O75449 491 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 S100BP04271 92 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 C8AP07357 584 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 CAPN1P07384 714 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 NCK1P16333 377 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 GGT1P19440 569 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 RPS3P23396 243 aaKnown RBP eCLIP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 HMOX2P30519 316 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 ARSFP54793 590 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 ZRANB3Q5FWF4 1079 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 ATAT1Q5SQI0 421 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 LETMD1Q6P1Q0 360 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 CYP20A1Q6UW02 462 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 ANKS3Q6ZW76 656 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 CPNE9Q8IYJ1 553 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 GPR65Q8IYL9 337 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 PDPRQ8NCN5 879 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 DNAJB8Q8NHS0 232 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 ITFG1Q8TB96 612 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 FNDC8Q8TC99 324 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 RNF145Q96MT1 663 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 C1orf50Q9BV19 199 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 TBCCD1Q9NVR7 557 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 RAPGEFL1Q9UHV5 662 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 FAF1Q9UNN5 650 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 PCDHGA11Q9Y5H2 935 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 CCL16O15467 120 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 OR1I1O60431 355 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 SEC24DO94855 1032 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 KCNH1O95259 989 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 VNN2O95498 520 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 ASGR2P07307 311 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 CASP2P42575 452 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 CDKN1CP49918 316 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 TMBIM6P55061 237 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 OR4D2P58180 307 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 CHRNB3Q05901 458 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 RAB33AQ14088 237 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 DAG1Q14118 895 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 RAB39AQ14964 217 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 INO80DQ53TQ3 878 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 NCEH1Q6PIU2 408 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF773Q6PK81 442 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 SLC2A7Q6PXP3 512 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 IL27RAQ6UWB1 636 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 RNF19BQ6ZMZ0 732 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 FRA10AC1Q70Z53 315 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 OR52B6Q8NGF0 335 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 VPS50Q96JG6 964 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 ZBTB18Q99592 522 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 CRISPLD1Q9H336 500 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 POLR1BQ9H9Y6 1135 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 LIN28AQ9H9Z2 209 aaKnown RBP12.67□□□□□ -0.38
C9orf3-201ENST00000277198 NTN4Q9HB63 628 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 MAGEE1Q9HCI5 957 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 HCFC1R1Q9NWW0 138 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 SMPD4Q9NXE4 827 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 EBF1Q9UH73 591 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 PKP3Q9Y446 797 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 BACE2Q9Y5Z0 518 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 CHD5Q8TDI0 1954 aa12.67□□□□□ -0.38
C9orf3-201ENST00000277198 UPK1AO00322 258 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 NRG2O14511 850 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-201ENST00000277198 WDR47O94967 919 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 SEC24AO95486 1093 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 SNAP29O95721 258 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 ALPLP05186 524 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 G6PDP11413 515 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 HMGCLP35914 325 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 MTHFRP42898 656 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 RANBP1P43487 201 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 RGS4P49798 205 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 RPS24P62847 133 aaKnown RBP12.66□□□□□ -0.38
C9orf3-201ENST00000277198 CREMQ03060 361 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 DUSP4Q13115 394 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 PMS2P3Q13401 168 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 GTF2H2Q13888 395 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 MYBPC3Q14896 1274 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 AP5B1Q2VPB7 878 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 FBXO48Q5FWF7 155 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 RBM48Q5RL73 367 aaKnown RBP12.66□□□□□ -0.38
C9orf3-201ENST00000277198 HECTD3Q5T447 861 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 TTC23Q5W5X9 447 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 GTF2H2CQ6P1K8 395 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 KCTD8Q6ZWB6 473 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 GOLGA7Q7Z5G4 137 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 DTWD1Q8N5C7 304 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 NRBF2Q96F24 287 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 SEPHS2Q99611 448 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 TRIM8Q9BZR9 551 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 NACA2Q9H009 215 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 ACTL8Q9H568 366 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 ASIC5Q9NY37 505 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 IL17CQ9P0M4 197 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 EIF3LQ9Y262 564 aaKnown RBP12.66□□□□□ -0.38
C9orf3-201ENST00000277198 PCDHGC4Q9Y5F7 938 aa12.66□□□□□ -0.38
C9orf3-201ENST00000277198 SLC30A1Q9Y6M5 507 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms