RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ASF1AQ9Y294 204 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 MRPS18BQ9Y676 258 aaKnown RBP15.6■□□□□ 0.09
USE1-201ENST00000263897 C2orf74A8MZ97 194 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 CD3EAPO15446 510 aaKnown RBP15.59■□□□□ 0.09
USE1-201ENST00000263897 NTRK1P04629 796 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 PRKAR1AP10644 381 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 PLA2G2AP14555 144 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 TPSB2P20231 275 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 NMBRP28336 390 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 OAS2P29728 719 aaKnown RBP15.59■□□□□ 0.09
USE1-201ENST00000263897 CCR7P32248 378 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 CCR10P46092 362 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 CDC20Q12834 499 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 TPSAB1Q15661 275 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 AARS2Q5JTZ9 985 aaKnown RBP15.59■□□□□ 0.09
USE1-201ENST00000263897 C16orf46Q6P387 395 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 LRRC8BQ6P9F7 803 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 LDB1Q86U70 411 aaPredicted RBP15.59■□□□□ 0.09
USE1-201ENST00000263897 RASGEF1CQ8N431 466 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 PITPNM3Q9BZ71 974 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 ADNPQ9H2P0 1102 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 AKIRIN1Q9H9L7 192 aaPredicted RBP15.59■□□□□ 0.09
USE1-201ENST00000263897 STARD5Q9NSY2 213 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 SOHLH2Q9NX45 425 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 MARCH4Q9P2E8 410 aaPredicted RBP15.59■□□□□ 0.09
USE1-201ENST00000263897 KCND3Q9UK17 655 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 ICKQ9UPZ9 632 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 PCDHB3Q9Y5E6 796 aa15.59■□□□□ 0.09
USE1-201ENST00000263897 TCRBV7S3A2A0A539 114 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 PRMT5O14744 637 aaPredicted RBP15.58■□□□□ 0.08
USE1-201ENST00000263897 KATNA1O75449 491 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 GPC4O75487 556 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 TPBGLP0DKB5 382 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 ST6GAL1P15907 406 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 MGAT1P26572 445 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 TTPAP49638 278 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 NFATC3Q12968 1075 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 TRIP13Q15645 432 aaPredicted RBP15.58■□□□□ 0.08
USE1-201ENST00000263897 KCTD19Q17RG1 926 aaPredicted RBP15.58■□□□□ 0.08
USE1-201ENST00000263897 SYTL3Q4VX76 610 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 UNC5AQ6ZN44 842 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 REXO1L1PQ8IX06 675 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 SLC22A15Q8IZD6 547 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 OR5K2Q8NHB8 316 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 ASZ1Q8WWH4 475 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 TRAPPC9Q96Q05 1148 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 KIFC1Q9BW19 673 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 TSSK1BQ9BXA7 367 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 AP1M1Q9BXS5 423 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 SYTL2Q9HCH5 934 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 LATS2Q9NRM7 1088 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 ACTR10Q9NZ32 417 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 TTC7AQ9ULT0 858 aaPredicted RBP15.58■□□□□ 0.08
USE1-201ENST00000263897 CDYLQ9Y232 598 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 PCDHGA6Q9Y5G7 932 aa15.58■□□□□ 0.08
USE1-201ENST00000263897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.57■□□□□ 0.08
USE1-201ENST00000263897 PIPSLA2A3N6 862 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 IQCF5A8MTL0 148 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 MAP3K7O43318 606 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 SCRG1O75711 98 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 RECKO95980 971 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 KRT14P02533 472 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 MSL3P1P0C860 447 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 SHMT2P34897 504 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 CSE1LP55060 971 aaKnown RBP15.57■□□□□ 0.08
USE1-201ENST00000263897 POLE2P56282 527 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 HSPA14Q0VDF9 509 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 DNASE1L3Q13609 305 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 DEFB109BQ30KR1 87 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 ATP1A1-AS1Q5TC04 95 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 TTC27Q6P3X3 843 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 FAM199XQ6PEV8 388 aaPredicted RBP15.57■□□□□ 0.08
USE1-201ENST00000263897 TMEM126BQ8IUX1 230 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 CT55Q8WUE5 264 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 APOBEC4Q8WW27 367 aaKnown RBP15.57■□□□□ 0.08
USE1-201ENST00000263897 MAGOHBQ96A72 148 aaKnown RBP15.57■□□□□ 0.08
USE1-201ENST00000263897 MS4A14Q96JA4 679 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 SLC25A18Q9H1K4 315 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 P2RY12Q9H244 342 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 GRPEL1Q9HAV7 217 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 MRM3Q9HC36 420 aaKnown RBP15.57■□□□□ 0.08
USE1-201ENST00000263897 SYBUQ9NX95 663 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 TUBD1Q9UJT1 453 aa15.57■□□□□ 0.08
USE1-201ENST00000263897 TDRKHQ9Y2W6 561 aaKnown RBP15.57■□□□□ 0.08
USE1-201ENST00000263897 C21orf140B9A014 251 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 CPNE3O75131 537 aaKnown RBP15.56■□□□□ 0.08
USE1-201ENST00000263897 CREG1O75629 220 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 SLCO2B1O94956 709 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 VAPBO95292 243 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 APOA4P06727 396 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 PVRP15151 417 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 AOAHP28039 575 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 MAGEA6P43360 314 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 SARNPP82979 210 aaKnown RBP15.56■□□□□ 0.08
USE1-201ENST00000263897 GPS1Q13098 491 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 ERV3-1Q14264 604 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 KCNJ11Q14654 390 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 DNAJC21Q5F1R6 531 aaKnown RBP15.56■□□□□ 0.08
USE1-201ENST00000263897 SPESP1Q6UW49 350 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 CES3Q6UWW8 571 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms