RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CDH1P12830 882 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 TACR1P25103 407 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 RPS3AP61247 264 aaKnown RBP12.75□□□□□ -0.37
SNX1-201ENST00000261889 HACD2Q6Y1H2 254 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 RIMKLAQ8IXN7 391 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 PACRGLQ8N7B6 248 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 LKAAEAR1Q8TD35 194 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 RORBQ92753 470 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 ZNF599Q96NL3 588 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 TRMOQ9BU70 441 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 MAGEE1Q9HCI5 957 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 VTA1Q9NP79 307 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 RNF186Q9NXI6 227 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 PSMD3O43242 534 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 KERAO60938 352 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 EEDO75530 441 aaKnown RBP12.75□□□□□ -0.37
SNX1-201ENST00000261889 RPP40O75818 363 aaKnown RBP12.75□□□□□ -0.37
SNX1-201ENST00000261889 NTRK1P04629 796 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 RAP2AP10114 183 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 COL6A1P12109 1028 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 PCYT1AP49585 367 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 MAPKAPK3Q16644 382 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 PHKG1Q16816 387 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 UPP1Q16831 310 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 UBE2UQ5VVX9 321 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 FAR1Q8WVX9 515 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 BEX2Q9BXY8 128 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 TNKS2Q9H2K2 1166 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 COMMD8Q9NX08 183 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 GPC6Q9Y625 555 aaPredicted RBP12.75□□□□□ -0.37
SNX1-201ENST00000261889 CXCR6O00574 342 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 E2F3O00716 465 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 AP3D1O14617 1153 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 FKBP9O95302 570 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 OPN1SWP03999 348 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 PABPC1P11940 636 aaKnown RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 FCGR1AP12314 374 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 ALOX12P18054 663 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 AZGP1P25311 298 aaKnown RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 DCTP40126 519 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 SGSHP51688 502 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 ERVK-8P63133 956 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 EMX2Q04743 252 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 SELENBP1Q13228 472 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 TIGD7Q6NT04 549 aaPredicted RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 PRMT9Q6P2P2 845 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 SUSD1Q6UWL2 747 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 FKBP9P1Q75LS8 142 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 B3GNT8Q7Z7M8 397 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 MSRB3Q8IXL7 192 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 ZYG11BQ9C0D3 744 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 EHD1Q9H4M9 534 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 ABCC13Q9NSE7 274 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 GNPTGQ9UJJ9 305 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 SLC6A14Q9UN76 642 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 FAM32AQ9Y421 112 aaKnown RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 ANGPTL3Q9Y5C1 460 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 TANC1Q9C0D5 1861 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 FAM92AA1XBS5 289 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 THPOP40225 353 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 OXA1LQ15070 435 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 PON2Q15165 354 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 TAF1CQ15572 869 aaPredicted RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 ATXN7L2Q5T6C5 722 aaPredicted RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 KLHL17Q6TDP4 642 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 ANGPTL8Q6UXH0 198 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 NLGN4XQ8N0W4 816 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 ADAMTS16Q8TE57 1224 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 KIAA1191Q96A73 305 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 PGAP3Q96FM1 320 aaPredicted RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 OR52E6Q96RD3 313 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 NDEL1Q9GZM8 345 aa12.74□□□□□ -0.37
SNX1-201ENST00000261889 TLR8Q9NR97 1041 aaKnown RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 AGO1Q9UL18 857 aaKnown RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 PDCD11Q14690 1871 aaKnown RBP12.74□□□□□ -0.37
SNX1-201ENST00000261889 F2P00734 622 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 OR1G1P47890 313 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 TGM4P49221 684 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 TMBIM6P55061 237 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ISL1P61371 349 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ADAM17P78536 824 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 AASDHQ4L235 1098 aaPredicted RBP12.73□□□□□ -0.37
SNX1-201ENST00000261889 RUNDC3AQ59EK9 446 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 CTSL3PQ5NE16 218 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 MANEALQ5VSG8 457 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 GOLGA7Q7Z5G4 137 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ZFAND4Q86XD8 727 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 CELF2-AS1Q8N7Q2 184 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 PRRG3Q9BZD7 231 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 LATS2Q9NRM7 1088 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 GKN1Q9NS71 199 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 NEUROG3Q9Y4Z2 214 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 C17orf102A2RUQ5 167 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ZNF99A8MXY4 864 aaPredicted RBP12.73□□□□□ -0.37
SNX1-201ENST00000261889 KPNA4O00629 521 aaPredicted RBP12.73□□□□□ -0.37
SNX1-201ENST00000261889 FAM20BO75063 409 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 PHC1P78364 1004 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 CDK5R2Q13319 367 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 LIMS2Q7Z4I7 341 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 METTL23Q86XA0 190 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms