RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 ASB9Q96DX5 294 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 TMEM246Q9BRR3 403 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 IL17RBQ9NRM6 502 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 HIF3AQ9Y2N7 669 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 SEPT4O43236 478 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 CDH1P12830 882 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 MRPS5P82675 430 aaKnown RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 ZNF155Q12901 538 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 GTF2H2Q13888 395 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 SLC9B1Q4ZJI4 515 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 FSTL4Q6MZW2 842 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 GTF2H2CQ6P1K8 395 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 METTL3Q86U44 580 aaKnown RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 LDB1Q86U70 411 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 SGCDQ92629 289 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 FCRL2Q96LA5 508 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-201ENST00000240185 BEX2Q9BXY8 128 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 BEX1Q9HBH7 125 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 TM9SF3Q9HD45 589 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 TMEM9Q9P0T7 183 aa13.64□□□□□ -0.23
TARDBP-201ENST00000240185 C5orf60A6NFR6 353 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 RNF225M0QZC1 329 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 NKRFO15226 690 aaKnown RBP eCLIP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 EFNA1P20827 205 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 NT5EP21589 574 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 GRIA1P42261 906 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 FCGRTP55899 365 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 GSCP56915 257 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 RHDQ02161 417 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 SLC10A7Q0GE19 358 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 HSPB3Q12988 150 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ATXN7L3Q14CW9 347 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ZACNQ401N2 412 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 DUS1LQ6P1R4 473 aaKnown RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 PIAS4Q8N2W9 510 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 BANPQ8N9N5 519 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 NKD2Q969F2 451 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 MFSD3Q96ES6 412 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 EBPLQ9BY08 206 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 IMP3Q9NV31 184 aaKnown RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CALML5Q9NZT1 146 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 PCDHGB7Q9Y5F8 929 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ELOA3DA6NLF2 546 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 C12orf71A8MTZ7 269 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 BTBD19C9JJ37 291 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CDRT1O95170 752 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 MYCLP1P12525 358 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 FOXN2P32314 431 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ELOA3BQ3SY89 546 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CRB2Q5IJ48 1285 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 OTOP3Q7RTS5 596 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ANKS1BQ7Z6G8 1248 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ZBTB2Q8N680 514 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ELOA3Q8NG57 546 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 FAM110BQ8TC76 370 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 HSPA12BQ96MM6 686 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 AGO3Q9H9G7 860 aaKnown RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 LRRC42Q9Y546 428 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 NPHS1O60500 1241 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 MATN4O95460 622 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 MAP3K8P41279 467 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CASP9P55211 416 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 GANABQ14697 944 aaKnown RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ATXN7L2Q5T6C5 722 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ANKRD22Q5VYY1 191 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 MTFR2Q6P444 385 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 GLB1L3Q8NCI6 653 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ATP6V1C2Q8NEY4 427 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 OR5B17Q8NGF7 314 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 KCNC2Q96PR1 638 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 TUBA1CQ9BQE3 449 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 RTFDC1Q9BY42 306 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CTPS2Q9NRF8 586 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 C1QTNF3-AMACRE9PGA6 284 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 XRCC1P18887 633 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 GPD2P43304 727 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 RPIAP49247 311 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CLCN4P51793 760 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 RPL26P61254 145 aaKnown RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 DSC3Q14574 896 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 PUM1Q14671 1186 aaKnown RBP eCLIP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ADGRA1Q86SQ6 560 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 FSTL5Q8N475 847 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 C12orf29Q8N999 325 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CREB3L1Q96BA8 519 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 FEM1CQ96JP0 617 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 KCTD15Q96SI1 283 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-201ENST00000240185 TMEM184CQ9NVA4 438 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 SPATA7Q9P0W8 599 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 IGSF9Q9P2J2 1179 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 ABCD2Q9UBJ2 740 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CYTH4Q9UIA0 394 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 CNTN6Q9UQ52 1028 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 YDJCA8MPS7 323 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 SNAPC5O75971 98 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 IL1BP01584 269 aa13.63□□□□□ -0.23
TARDBP-201ENST00000240185 MATN1P21941 496 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms