RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CCNB2O95067 398 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 SKP1P63208 163 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 ZNF615Q8N8J6 731 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 DOK4Q8TEW6 326 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 SNX7Q9UNH6 387 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 MROH1Q8NDA8 1641 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 IFNGP01579 166 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 IFNA6P05013 189 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 LAMP2P13473 410 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 CCNCP24863 283 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 L1CAMP32004 1257 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 ACVRL1P37023 503 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 DNASE1L1P49184 302 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 LCP2Q13094 533 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 LACTB2Q53H82 288 aaPredicted RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 FATE1Q969F0 183 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 POLE4Q9NR33 117 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 PNO1Q9NRX1 252 aaKnown RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 AP3M1Q9Y2T2 418 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 FAM86C2PA6NEL3 165 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 TSPAN9O75954 239 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 EIF1AXP47813 144 aaKnown RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 WDR4P57081 412 aaKnown RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 MFSD5Q6N075 450 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 RGMBQ6NW40 437 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 ARNTL2Q8WYA1 636 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 DNAAF2Q9NVR5 837 aaKnown RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 MIOSQ9NXC5 875 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 TNFRSF10BO14763 440 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 RPP14O95059 124 aaKnown RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 NCBP2P52298 156 aaKnown RBP eCLIP13.39□□□□□ -0.271e-18■□□□□ 8.9
TGFBR3-201ENST00000212355 ARFIP1P53367 373 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 DUSP28Q4G0W2 176 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 GALNT13Q8IUC8 556 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 FOXRED2Q8IWF2 684 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 TWNKQ96RR1 684 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 CCSER2Q9H7U1 834 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 IFNW1P05000 195 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 DDX6P26196 483 aaKnown RBP eCLIP13.39□□□□□ -0.271e-8■■■■□ 19.7
TGFBR3-201ENST00000212355 TTKP33981 857 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 ZNF648Q5T619 568 aaPredicted RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 ATCAYQ86WG3 371 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 RAB43Q86YS6 212 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 C7orf61Q8IZ16 206 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 SKA1Q96BD8 255 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 TLCD1Q96CP7 247 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 C12orf66Q96MD2 445 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 CCDC177Q9NQR7 707 aaPredicted RBP13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 PDE10AQ9Y233 779 aa13.39□□□□□ -0.27
TGFBR3-201ENST00000212355 XRCC1P18887 633 aaPredicted RBP13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 TM4SF1P30408 202 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 HOXA10P31260 410 aaPredicted RBP13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 CHAF1BQ13112 559 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 CBFBQ13951 182 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 TIGD5Q53EQ6 642 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 C2orf27AQ580R0 203 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 KLHDC10Q6PID8 442 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 HERC2P3Q9BVR0 1158 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 IFT27Q9BW83 186 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 C1QTNF1Q9BXJ1 281 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 CHMP1AQ9HD42 196 aaPredicted RBP13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 J3QRK9 145 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 TIE1P35590 1138 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 CD83Q01151 205 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 TLR1Q15399 786 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 DEFB115Q30KQ5 88 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 FAM46CQ5VWP2 391 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 JPH3Q8WXH2 748 aaPredicted RBP13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 SMG7Q92540 1137 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 FBXL8Q96CD0 374 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 PKP4Q99569 1192 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 BEX2Q9BXY8 128 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 MED28Q9H204 178 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 RMI1Q9H9A7 625 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 BEX1Q9HBH7 125 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 ZSCAN5BA6NJL1 495 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 SOX14O95416 240 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 RHOQP17081 205 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 PIGFQ07326 219 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 GPR68Q15743 365 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 PLET1Q6UQ28 207 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 ZNF627Q7L945 461 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 FAM83DQ9H4H8 585 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 EIF3KQ9UBQ5 218 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 OAZ3Q9UMX2 235 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 TPTEP56180 551 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 SIRPB2Q5JXA9 342 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 RBM20Q5T481 1227 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 VITQ6UXI7 678 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 TMPRSS11AQ6ZMR5 421 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 CEP68Q76N32 757 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 PHTF2Q8N3S3 785 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 UNC93B1Q9H1C4 597 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 AKTIPQ9H8T0 292 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 ITM2CQ9NQX7 267 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 NUDT4Q9NZJ9 180 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 DEC1Q9P2X7 70 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 SDC2P34741 201 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms