RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gpc6Q9R087 555 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Btbd35f21A0A140T8Q5 498 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pramef25A2ASI9 494 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pramef20B1ARV6 477 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gm12800B1AUV4 484 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gm5483B2RV77 97 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Btbd35f22J3QN64 498 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gm12794L7MTS5 483 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Matn3O35701 481 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cpa3P15089 417 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cd86P42082 309 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cyp2c39P56656 490 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gabarapl2P60521 117 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Znf865Q3U3I9 1058 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Xrra1Q3U3V8 786 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cldn11Q60771 207 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Arnt2Q61324 712 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pfkfb4Q6DTY7 469 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Kif18bQ6PFD6 834 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 TxlngQ8BHN1 524 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Casp9Q8C3Q9 454 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 1700020N01RikQ8CF20 87 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Angptl7Q8R1Q3 337 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cox18Q8VC74 331 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr847Q8VFF4 312 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr691Q8VGW5 322 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc15a4Q91W98 574 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Sdcbp2Q99JZ0 292 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cryl1Q99KP3 319 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Upk3bl1Q9D701 249 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Q9DAD0 168 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 PgdQ9DCD0 483 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 HgfacQ9R098 653 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Clic1Q9Z1Q5 241 aaKnown RBP13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 TriobpQ99KW3 2014 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Sirpb1aA0A0A6YYP6 397 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Igkv5-43A0A0B4J1J2 115 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Acbd4E9Q289 327 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Aldh1a1P24549 501 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Etv2P41163 335 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gabrr2P56476 465 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Arhgap39P59281 1107 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Arl1P61211 181 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pitx1P70314 315 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 MybphP70402 483 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 RogdiQ3TDK6 287 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cfap97Q6ZPR1 541 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc39a4Q78IQ7 660 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 RragdQ7TT45 449 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Vac14Q80WQ2 782 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Zbtb33Q8BN78 671 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Mpp7Q8BVD5 576 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 4921511C20RikQ8BVT7 469 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ptov1Q91VU8 416 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Golga7Q91W53 137 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ptgr1Q91YR9 329 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc44a3Q921V7 656 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Q922M7 232 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tcam1Q99NB3 548 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Chaf1bQ9D0N7 572 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Arpc5lQ9D898 153 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Armc8Q9DBR3 673 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 GabarapQ9DCD6 117 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nipa2Q9JJC8 359 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr414E9Q5P8 317 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Grk4O70291 574 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Usp2O88623 613 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc2a2P14246 523 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pdha2P35487 391 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Samd12Q0VE29 161 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 StradaQ3UUJ4 431 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Kcna5Q61762 602 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Angptl1Q640P2 490 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr1036Q7TR85 310 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cyp20a1Q8BKE6 462 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 4932411N23RikQ8C0S0 470 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pitrm1Q8K411 1036 aaKnown RBP13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Sbk1Q8QZX0 417 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Vmn1r215Q8R264 300 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nle1Q8VEJ4 485 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Mtmr14Q8VEL2 648 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Barhl2Q8VIB5 384 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 AclyQ91V92 1091 aaKnown RBP13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Abtb1Q99LJ2 478 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pramel1Q99MW3 458 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Kdm8Q9CXT6 414 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 TesclQ9DAJ7 231 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Fezf2Q9ESP5 455 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 M1apQ9Z0E1 529 aa13.19□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pcdh15Q99PJ1 1943 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Arrdc4A0A0B4J1F4 415 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pkd2l1A2A259 760 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Fpr-rs4A4FUQ5 323 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 MndalD0QMC3 538 aaKnown RBP13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gm5415E9PXF3 478 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gm10715J3QP74 227 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gm5724L7N264 670 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pole2O54956 527 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tm9sf2P58021 662 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 YwhahP68510 246 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms