RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	NAPRT	Q6XQN6	538 aa		14.63	□□□□□ -0.07
PHGDH-231	ENST00000641939	PHC3	Q8NDX5	983 aa		14.63	□□□□□ -0.07
PHGDH-231	ENST00000641939	LCN9	Q8WX39	176 aa		14.63	□□□□□ -0.07
PHGDH-231	ENST00000641939	UBXN4	Q92575	508 aa		14.63	□□□□□ -0.07
PHGDH-231	ENST00000641939	NAPG	Q99747	312 aa	Predicted RBP	14.63	□□□□□ -0.07
PHGDH-231	ENST00000641939	CARD6	Q9BX69	1037 aa		14.63	□□□□□ -0.07
PHGDH-231	ENST00000641939	SRMS	Q9H3Y6	488 aa		14.63	□□□□□ -0.07
PHGDH-231	ENST00000641939	PIEZO2	Q9H5I5	2752 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	IGHV5-51	A0A0C4DH38	117 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	UBA6	A0AVT1	1052 aa	Predicted RBP	14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	MAGEB16	A2A368	324 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	GOLGA8M	H3BSY2	632 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	MATN2	O00339	956 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	EFS	O43281	561 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	NDUFS3	O75489	264 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	ITGB6	P18564	788 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	POLR2C	P19387	275 aa	Predicted RBP	14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	ACADL	P28330	430 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	CCR7	P32248	378 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	ARCN1	P48444	511 aa	Known RBP	14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	SH3BP2	P78314	561 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	PRKAA1	Q13131	559 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	IL11RA	Q14626	422 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	KIAA0930	Q6ICG6	404 aa	Predicted RBP	14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	MRNIP	Q6NTE8	343 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	VASH2	Q86V25	355 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	KMT5C	Q86Y97	462 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	OTUD6B	Q8N6M0	293 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	NAT8L	Q8N9F0	302 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	OR52E1	Q8NGJ3	308 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	NKD1	Q969G9	470 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	SLC41A2	Q96JW4	573 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	SERPINB12	Q96P63	405 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	UBL7	Q96S82	380 aa	Predicted RBP	14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	MAP3K3	Q99759	626 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	HGH1	Q9BTY7	390 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	SPRY4	Q9C004	299 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	DDX47	Q9H0S4	455 aa	Known RBP	14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	TFB2M	Q9H5Q4	396 aa	Known RBP	14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	SAMD15	Q9P1V8	674 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	GNPTG	Q9UJJ9	305 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	PILRA	Q9UKJ1	303 aa		14.62	□□□□□ -0.07
PHGDH-231	ENST00000641939	SEC16A	O15027	2179 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	FAM237B	A0A1B0GVD1	139 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	CTAGE9	A4FU28	777 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	SDR42E2	A6NKP2	422 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	BHMG1	C9JSJ3	638 aa	Predicted RBP	14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	GOLGA8K	D6RF30	607 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	GOLGA8T	H3BQL2	631 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	RAD1	O60671	282 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	PAM	P19021	973 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	RPS3	P23396	243 aa	Known RBP eCLIP	14.61	□□□□□ -0.07	2e-12	■■■■■ 33.6
PHGDH-231	ENST00000641939	KPNA2	P52292	529 aa	Known RBP	14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	CSE1L	P55060	971 aa	Known RBP	14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	PRKG2	Q13237	762 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	SRSF6	Q13247	344 aa	Known RBP	14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	SOWAHC	Q53LP3	525 aa	Predicted RBP	14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	PTRHD1	Q6GMV3	140 aa	Known RBP	14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	CYB5D1	Q6P9G0	228 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	LRRC6	Q86X45	466 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	PPIL6	Q8IXY8	311 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	CACNA2D3	Q8IZS8	1091 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	CARF	Q8N187	725 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	IL22RA1	Q8N6P7	574 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	SIDT2	Q8NBJ9	832 aa	Known RBP	14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	OR5AR1	Q8NGP9	310 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	ASZ1	Q8WWH4	475 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	SLCO2A1	Q92959	643 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	CAPZA3	Q96KX2	299 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	OR6C1	Q96RD1	312 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	P2RY12	Q9H244	342 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	PCYOX1	Q9UHG3	505 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	ASF1A	Q9Y294	204 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	TMEM184B	Q9Y519	407 aa	Predicted RBP	14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	SAR1B	Q9Y6B6	198 aa		14.61	□□□□□ -0.07
PHGDH-231	ENST00000641939	IQCF5	A8MTL0	148 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	PFDN6	O15212	129 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	GPC4	O75487	556 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	STK17B	O94768	372 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	ZBTB11	O95625	1053 aa	Predicted RBP	14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	APOA4	P06727	396 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	MAP4	P27816	1152 aa	Known RBP	14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	AOAH	P28039	575 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	MAGEA3	P43357	314 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	ARL4D	P49703	201 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	HSD11B2	P80365	405 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	RHD	Q02161	417 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	HSPA14	Q0VDF9	509 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	PTK6	Q13882	451 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	TMED2	Q15363	201 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	TYSND1	Q2T9J0	566 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	ANKRD20A4	Q4UJ75	823 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	RNF187	Q5TA31	235 aa	Predicted RBP	14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	RNASEH2B	Q5TBB1	312 aa	Known RBP	14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	AMIGO1	Q86WK6	493 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	CREG2	Q8IUH2	290 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	TBC1D21	Q8IYX1	336 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	SLC22A15	Q8IZD6	547 aa		14.6	□□□□□ -0.07
PHGDH-231	ENST00000641939	NLGN4X	Q8N0W4	816 aa		14.6	□□□□□ -0.07

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms