RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SEMA3AQ14563 771 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 SF1Q15637 639 aaKnown RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 ZNHIT3Q15649 155 aaPredicted RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 CST6Q15828 149 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 GPRC6AQ5T6X5 926 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 MFSD4BQ5TF39 518 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 TRIM68Q6AZZ1 485 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 GTF2H2CQ6P1K8 395 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 SLC36A4Q6YBV0 504 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 GALNT7Q86SF2 657 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 PATL1Q86TB9 770 aaKnown RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 GKN2Q86XP6 184 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 UNC5BQ8IZJ1 945 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 GLIS1Q8NBF1 620 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 RHEBL1Q8TAI7 183 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 SMPDL3AQ92484 453 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 GLYATL1Q969I3 302 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 EME1Q96AY2 570 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 NSMCE2Q96MF7 247 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 ANKRD27Q96NW4 1050 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 CITED4Q96RK1 184 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 FAM129BQ96TA1 746 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 HOPXQ9BPY8 73 aaPredicted RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 KCTD14Q9BQ13 255 aaPredicted RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 LRFN3Q9BTN0 628 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 ERVK-6Q9BXR3 956 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 PRRG3Q9BZD7 231 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 SGK2Q9HBY8 427 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 DKK3Q9UBP4 350 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 CD84Q9UIB8 345 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 HAO1Q9UJM8 370 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 PRPF19Q9UMS4 504 aaKnown RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 FAF1Q9UNN5 650 aaPredicted RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 HS3ST2Q9Y278 367 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 RHPN2P1A8MT19 583 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 H0Y3Z8 333 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 FFAR2O15552 330 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 TNFRSF21O75509 655 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 LYPLA1O75608 230 aaPredicted RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 RECQL5O94762 991 aaPredicted RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 CPSF4O95639 269 aaKnown RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 SLC35G6P0C7Q6 338 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 HPGDP15428 266 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 HNF1BP35680 557 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 ALDH9A1P49189 494 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 TBL3Q12788 808 aaKnown RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 BNIP2Q12982 314 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 SUZ12Q15022 739 aaKnown RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 TSNQ15631 228 aaKnown RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 CPSF6Q16630 551 aaKnown RBP eCLIP5.43□□□□□ -1.543e-6■■■□□ 16.2
CHD2-227ENST00000637572 MAPKAPK3Q16644 382 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 MSS51Q4VC12 460 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 WLSQ5T9L3 541 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 LAYNQ6UX15 382 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 DCUN1D3Q8IWE4 304 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 ARHGAP12Q8IWW6 846 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 RFWD2Q8NHY2 731 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 FAM3CQ92520 227 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 ZNF689Q96CS4 500 aaPredicted RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 C19orf60Q96EN9 201 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 ZNF334Q9HCZ1 680 aaPredicted RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 OXSMQ9NWU1 459 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 ADPRHL2Q9NX46 363 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 DHRS7Q9Y394 339 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 PCDHGA2Q9Y5H1 932 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 SNX5Q9Y5X3 404 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 STON1Q9Y6Q2 735 aa5.43□□□□□ -1.54
CHD2-227ENST00000637572 ATXN2Q99700 1313 aaKnown RBP5.43□□□□□ -1.54
CHD2-227ENST00000637572 FAM155BO75949 473 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 HMGA1P17096 107 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 TNNI3P19429 210 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 RPS3P23396 243 aaKnown RBP eCLIP5.42□□□□□ -1.54
CHD2-227ENST00000637572 CD70P32970 193 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 MMP16P51512 607 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 DNAJB13P59910 316 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 NTHL1P78549 312 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SEMA3BQ13214 749 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CYTH1Q15438 398 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 C11orf91Q3C1V1 193 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 FAM98BQ52LJ0 330 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 CDKL4Q5MAI5 379 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 METTL2BQ6P1Q9 378 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 CHST15Q7LFX5 561 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 SNX32Q86XE0 403 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 HID1Q8IV36 788 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ZDHHC14Q8IZN3 488 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SIDT2Q8NBJ9 832 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 GPR150Q8NGU9 434 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 NELL1Q92832 810 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 DNASE1L2Q92874 299 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ITCHQ96J02 903 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 GATA5Q9BWX5 397 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 MUC13Q9H3R2 512 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CARS2Q9HA77 564 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 IL1RL2Q9HB29 575 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 LRTM1Q9HBL6 345 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CCDC167Q9P0B6 97 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TMCC3Q9ULS5 477 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 DICER1Q9UPY3 1922 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 SNTNA6NMZ2 147 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms