RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CD3EAPO15446 510 aaKnown RBP13.43□□□□□ -0.26
PNKP-228ENST00000637325 KIF5CO60282 957 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 ITGB6P18564 788 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 WT1P19544 449 aaPredicted RBP13.43□□□□□ -0.26
PNKP-228ENST00000637325 CDH3P22223 829 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 MGAT1P26572 445 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 CRADDP78560 199 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 HSD11B2P80365 405 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 PLOD1Q02809 727 aaPredicted RBP13.43□□□□□ -0.26
PNKP-228ENST00000637325 ACY1Q03154 408 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 ABHD18Q0P651 414 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 GPS1Q13098 491 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 PRKG2Q13237 762 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 TUBB3Q13509 450 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 ZNF658BQ4V348 819 aaPredicted RBP13.43□□□□□ -0.26
PNKP-228ENST00000637325 TMTC4Q5T4D3 741 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 LRRC8BQ6P9F7 803 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 C6orf15Q6UXA7 325 aaPredicted RBP13.43□□□□□ -0.26
PNKP-228ENST00000637325 ZNF534Q76KX8 674 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 TIPARPQ7Z3E1 657 aaKnown RBP13.43□□□□□ -0.26
PNKP-228ENST00000637325 REXO1L1PQ8IX06 675 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 RASGEF1CQ8N431 466 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 STAMBPL1Q96FJ0 436 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 SLC41A2Q96JW4 573 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 SMG1Q96Q15 3661 aaKnown RBP13.43□□□□□ -0.26
PNKP-228ENST00000637325 HGH1Q9BTY7 390 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 SPRY4Q9C004 299 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 SOHLH2Q9NX45 425 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 TRMT1Q9NXH9 659 aaKnown RBP13.43□□□□□ -0.26
PNKP-228ENST00000637325 CCDC88CQ9P219 2028 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 SEMA5BQ9P283 1151 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 LNPEPQ9UIQ6 1025 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 ASF1AQ9Y294 204 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 GOLGA6L10A0A0M3HER8 536 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 LOC101059948A0A1B0GTJ6 334 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 ZNF891A8MT65 544 aaPredicted RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 PGRMC1O00264 195 aaKnown RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 MAP3K7O43318 606 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 NDUFS3O75489 264 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 SPAG6O75602 509 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 KIAA0754O94854 1291 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 ZBTB11O95625 1053 aaPredicted RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 DLGAP3O95886 979 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 CCNYL3P0C7X3 344 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 EBLN1P0CF75 366 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 FGF5P12034 268 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 FOLR1P15328 257 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 NMBRP28336 390 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 TTPAP49638 278 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 KPNA2P52292 529 aaKnown RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 CSE1LP55060 971 aaKnown RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 CYP4F2P78329 520 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 COL9A2Q14055 689 aaPredicted RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 LY6DQ14210 128 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 MAP7Q14244 749 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 SEMA3AQ14563 771 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 KCNAB1Q14722 419 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 KCTD19Q17RG1 926 aaPredicted RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.42□□□□□ -0.26
PNKP-228ENST00000637325 PCSK4Q6UW60 755 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 NAPRTQ6XQN6 538 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 LDB1Q86U70 411 aaPredicted RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 HOOK3Q86VS8 718 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 BPHLQ86WA6 291 aaPredicted RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 AMIGO1Q86WK6 493 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 UNC5BQ8IZJ1 945 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 CARFQ8N187 725 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 GALNT6Q8NCL4 622 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 OR52E1Q8NGJ3 308 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 SGSM3Q96HU1 749 aa13.42□□□□□ -0.26
PNKP-228ENST00000637325 TFB2MQ9H5Q4 396 aaKnown RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
PNKP-228ENST00000637325 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.41□□□□□ -0.26
PNKP-228ENST00000637325 TCRBV7S3A2A0A539 114 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 SLC5A10A0PJK1 596 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 BTN3A1O00481 513 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 KDM1AO60341 852 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 MT-ND3P03897 115 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 ITGB2P05107 769 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 ZNF28P17035 718 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 COILP38432 576 aaPredicted RBP13.41□□□□□ -0.26
PNKP-228ENST00000637325 PTRHD1Q6GMV3 140 aaKnown RBP13.41□□□□□ -0.26
PNKP-228ENST00000637325 TTC27Q6P3X3 843 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 CASC4Q6P4E1 433 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 FBXO38Q6PIJ6 1188 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 CCDC137Q6PK04 289 aaKnown RBP13.41□□□□□ -0.26
PNKP-228ENST00000637325 SDCCAG8Q86SQ7 713 aaPredicted RBP13.41□□□□□ -0.26
PNKP-228ENST00000637325 TBC1D21Q8IYX1 336 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 D2HGDHQ8N465 521 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 OR5AR1Q8NGP9 310 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 GRK7Q8WTQ7 553 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 EXTL1Q92935 676 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 OSBPL9Q96SU4 736 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 CARD6Q9BX69 1037 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 SLC12A9Q9BXP2 914 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 XKR8Q9H6D3 395 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 FANCEQ9HB96 536 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 MRM3Q9HC36 420 aaKnown RBP13.41□□□□□ -0.26
PNKP-228ENST00000637325 C1GALT1Q9NS00 363 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 FGF21Q9NSA1 209 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms