RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 NEMP1O14524 444 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 TRAFD1O14545 582 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 TNFSF14O43557 240 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 AP1G1O43747 822 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 GCATO75600 419 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 PALMO75781 387 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 RNF8O76064 485 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 POP4O95707 220 aaKnown RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 LDOC1O95751 146 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 HLA-DQB2P05538 268 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 PDHA1P08559 390 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 ALPIP09923 528 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 MYBL1P10243 752 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 EGR2P11161 476 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 TNNT1P13805 278 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 HNRNPH3P31942 346 aaKnown RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 PCK1P35558 622 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 MMP12P39900 470 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 CASRP41180 1078 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 RXRGP48443 463 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 MARCKSL1P49006 195 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 SCNN1BP51168 640 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 MECP2P51608 486 aaKnown RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 NDST2P52849 883 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 AIF1P55008 147 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 CDH6P55285 790 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 YBEYP58557 167 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 RPS21P63220 83 aaKnown RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 TPM4P67936 248 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 DSC2Q02487 901 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 IL10RBQ08334 325 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 SLC20A2Q08357 652 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 TBX2Q13207 712 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 KRT81Q14533 505 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 MESDQ14696 234 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 SLC18A3Q16572 532 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 ALG11Q2TAA5 492 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 DEFB133Q30KQ1 61 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 TMEM52BQ4KMG9 183 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 HES3Q5TGS1 186 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 DENND2CQ68D51 928 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 SPECC1LQ69YQ0 1117 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 KIAA1161Q6NSJ0 714 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 GUSBP11Q6P575 273 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 C19orf48Q6RUI8 117 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 CCNI2Q6ZMN8 369 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 SRLQ86TD4 932 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 NIPA2Q8N8Q9 360 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 CPEB3Q8NE35 698 aaKnown RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 ZNF548Q8NEK5 533 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 CCL4L1Q8NHW4 92 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 CXorf40AQ8TE69 158 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 PDCD6IPQ8WUM4 868 aaKnown RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 SYN2Q92777 582 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 TSACCQ96A04 125 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 CENPTQ96BT3 561 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 ECHDC3Q96DC8 303 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 PDXPQ96GD0 296 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 DNAJC7Q99615 494 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 HERPUD2Q9BSE4 406 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 LRRC61Q9BV99 259 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 CPEB1Q9BZB8 566 aaKnown RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 CLPBQ9H078 707 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 SUDS3Q9H7L9 328 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 NOD2Q9HC29 1040 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 NT5MQ9NPB1 228 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 MRPL40Q9NQ50 206 aaKnown RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 CTTNBP2NLQ9P2B4 639 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 B4GALT6Q9UBX8 382 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 IP6K2Q9UHH9 426 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 DMTF1Q9Y222 760 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 TMA7Q9Y2S6 64 aaKnown RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 PCDHB1Q9Y5F3 818 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 PCYT1BQ9Y5K3 369 aaPredicted RBP4.57□□□□□ -1.68
CUL3-216ENST00000617432 CELSR3Q9NYQ7 3312 aa4.57□□□□□ -1.68
CUL3-216ENST00000617432 SPTY2D1-AS1A0A0U1RR47 76 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 A0A1W2PNU3 283 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 FAM221BA6H8Z2 402 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TMEM202A6NGA9 273 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 ZSCAN5CA6NGD5 496 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 NPIPB15A6NHN6 443 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 ARHGAP42A6NI28 874 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 LRRC3CA6NJW4 275 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 C3orf70A6NLC5 250 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 FPGTO14772 594 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TSPAN6O43657 245 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TLX3O43711 291 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 RFPL3O75679 317 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TM7SF2O76062 418 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 PROSCO94903 275 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 GAAP10253 952 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 GEMIN4P57678 1058 aaKnown RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 DYNLT1P63172 113 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 NIPAL4Q0D2K0 466 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 GALNT2Q10471 571 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 ZBTB17Q13105 803 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 PIGHQ14442 188 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 CNGA3Q16281 694 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 CDKN3Q16667 212 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 UGP2Q16851 508 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms