RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 CXADRP78310 365 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 PSG6Q00889 435 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 E2F1Q01094 437 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 PMP22Q01453 160 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 RHAGQ02094 409 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 PRKCEQ02156 737 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 GFPT1Q06210 699 aaPredicted RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 TOB2Q14106 344 aaPredicted RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 SLC39A14Q15043 492 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 GEN1Q17RS7 908 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 KRT24Q2M2I5 525 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 KLHL26Q53HC5 615 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 ZNF789Q5FWF6 425 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 TREML2Q5T2D2 321 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 TEDDM1Q5T9Z0 273 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 B3GNTL1Q67FW5 361 aaPredicted RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 KRT39Q6A163 491 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 FBXO42Q6P3S6 717 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 TMEM182Q6ZP80 229 aaPredicted RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 QSOX2Q6ZRP7 698 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 C11orf57Q6ZUT1 292 aaPredicted RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 Q7L0L9 218 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 COPS6Q7L5N1 327 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 TLK2Q86UE8 772 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 FAM219AQ8IW50 185 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 KDM8Q8N371 416 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 C12orf76Q8N812 135 aaPredicted RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 OR52K2Q8NGK3 314 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 OR14L1PQ8NHC6 308 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 RNASE8Q8TDE3 154 aaKnown RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 TAS1R2Q8TE23 839 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 TRPC4APQ8TEL6 797 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 CHURC1Q8WUH1 139 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 XAGE5Q8WWM1 108 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 ROBO4Q8WZ75 1007 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 EXTL1Q92935 676 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 LENG9Q96B70 501 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 SPACA9Q96E40 222 aaPredicted RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 RNF31Q96EP0 1072 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 EDC3Q96F86 508 aaKnown RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 HES6Q96HZ4 224 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 SAMD8Q96LT4 415 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 BBS4Q96RK4 519 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 THUMPD2Q9BTF0 503 aaKnown RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 FRMD8Q9BZ67 464 aaPredicted RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 RTN4RQ9BZR6 473 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 KCNK15Q9H427 330 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 VPS37BQ9H9H4 285 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 GRHL1Q9NZI5 618 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 TMOD2Q9NZR1 351 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 FBXO40Q9UH90 709 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 FAM153AQ9UHL3 310 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 FZD4Q9ULV1 537 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 SNX7Q9UNH6 387 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 NUDCQ9Y266 331 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 WDR37Q9Y2I8 494 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 LSM4Q9Y4Z0 139 aaKnown RBP3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 CEPT1Q9Y6K0 416 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 MYO3BQ8WXR4 1341 aa3.86□□□□□ -1.79
IGHV3-29-201ENST00000604817 LAMB4A4D0S4 1761 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 CCL15-CCL14A0A0B4J2E2 113 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 C1orf226A1L170 272 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 AHRRA9YTQ3 701 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 TRIM77I1YAP6 450 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 AP4M1O00189 453 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 CES2O00748 559 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 RASGRF2O14827 1237 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 ANGPT2O15123 496 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 TSC22D2O75157 780 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 MED24O75448 989 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 DAB1O75553 588 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 CDKL5O76039 1030 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 KCNK5O95279 499 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 IL1AP01583 271 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 HLA-DQA2P01906 255 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 RLN1P04808 185 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 HIST1H2ABP04908 130 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 IL6RP08887 468 aaPredicted RBP3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 C8orf89P0DMQ9 161 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 ARF4P18085 180 aaPredicted RBP3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 EIF2S2P20042 333 aaKnown RBP3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 HIST1H2ADP20671 130 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 NDUFS1P28331 727 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 RYKP34925 604 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 SLC16A2P36021 539 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 FRKP42685 505 aaPredicted RBP3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 GPR143P51810 404 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 VAV2P52735 878 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 EEFSECP57772 596 aaKnown RBP3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 SUMO2P61956 95 aaKnown RBP3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 HNRNPKP61978 463 aaKnown RBP eCLIP3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 CCNA1P78396 465 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 GCNT1Q02742 428 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 GBE1Q04446 702 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 SPOCK1Q08629 439 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 DMWDQ09019 674 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 COX10Q12887 443 aa3.85□□□□□ -1.79
IGHV3-29-201ENST00000604817 RESTQ13127 1097 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms