RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SPAG6O75602 509 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 FAM155BO75949 473 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 WISP3O95389 354 aaPredicted RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 MATN4O95460 622 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 MT-CO3P00414 261 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 RPLP0P05388 317 aaKnown RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 APOA4P06727 396 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 FDXRP22570 491 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 CSF2RBP32927 897 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 EPHA4P54764 986 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 CAMK2BQ13554 666 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 EFTUD2Q15029 972 aaKnown RBP eCLIP13.39□□□□□ -0.273e-6■■□□□ 13.2
VRK3-219ENST00000600137 HES3Q5TGS1 186 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 HECTD2Q5U5R9 776 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 TMEM207Q6UWW9 146 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 USP53Q70EK8 1073 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 OTOAQ7RTW8 1153 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 ERMP1Q7Z2K6 904 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 TMPRSS12Q86WS5 348 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 RBM12BQ8IXT5 1001 aaKnown RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 ZBTB2Q8N680 514 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 AVL9Q8NBF6 648 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 OR5AR1Q8NGP9 310 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 GABPB2Q8TAK5 448 aaPredicted RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 JPH3Q8WXH2 748 aaPredicted RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 INPP5DQ92835 1189 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 SLC38A3Q99624 504 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 MENTQ9BUN1 341 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 TSSK1BQ9BXA7 367 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 RHOJQ9H4E5 214 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 KIR3DX1Q9H7L2 352 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 PDP2Q9P2J9 529 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 CORO1CQ9ULV4 474 aaPredicted RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 MTO1Q9Y2Z2 717 aaKnown RBP13.39□□□□□ -0.27
VRK3-219ENST00000600137 VWA7Q9Y334 891 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 NFS1Q9Y697 457 aa13.39□□□□□ -0.27
VRK3-219ENST00000600137 A0A1W2PNU3 283 aaPredicted RBP13.38□□□□□ -0.27
VRK3-219ENST00000600137 HMX2A2RU54 273 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 TCEA3O75764 348 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 TSPAN12O95859 305 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 SPINK2P20155 84 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 ATP5DP30049 168 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 VSNL1P62760 191 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 TUBB4BP68371 445 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 GPLD1P80108 840 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 FOXC1Q12948 553 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 ABRQ12979 859 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 ERCC6LQ2NKX8 1250 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 PAQR3Q6TCH7 311 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 CEP128Q6ZU80 1094 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 B3GNT8Q7Z7M8 397 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 PIM3Q86V86 326 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 SLITRK4Q8IW52 837 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 WDR48Q8TAF3 677 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 FERD3LQ96RJ6 166 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 RBBP8Q99708 897 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 CPNE1Q99829 537 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 NUDT22Q9BRQ3 303 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 ABCG4Q9H172 646 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 ACSS3Q9H6R3 686 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 MVB12BQ9H7P6 319 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 RDH14Q9HBH5 336 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 NSMCE4AQ9NXX6 385 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 KCNK4Q9NYG8 393 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 TMEM9Q9P0T7 183 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 KLK13Q9UKR3 277 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 WDFY3Q8IZQ1 3526 aa13.38□□□□□ -0.27
VRK3-219ENST00000600137 FAM149AA5PLN7 773 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 D6RAR5 112 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 IFRD1O00458 451 aaPredicted RBP13.37□□□□□ -0.27
VRK3-219ENST00000600137 ACSL3O95573 720 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 CPNE6O95741 557 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 STX2P32856 288 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 SKIV2L2P42285 1042 aaKnown RBP13.37□□□□□ -0.27
VRK3-219ENST00000600137 CSRP3P50461 194 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 TAS2R39P59534 338 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 TARDBPQ13148 414 aaKnown RBP eCLIP13.37□□□□□ -0.27
VRK3-219ENST00000600137 PRKG2Q13237 762 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 NAA30Q147X3 362 aaPredicted RBP13.37□□□□□ -0.27
VRK3-219ENST00000600137 SLMAPQ14BN4 828 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 ISXQ2M1V0 245 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 KLHL38Q2WGJ6 581 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 AMZ1Q400G9 498 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 CCSMST1Q4G0I0 132 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 SYTL3Q4VX76 610 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 NEK10Q6ZWH5 1172 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 CEP97Q8IW35 865 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 TRIM48Q8IWZ4 208 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 CPNE9Q8IYJ1 553 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 TBC1D21Q8IYX1 336 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 PPM1NQ8N819 430 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 OR52E1Q8NGJ3 308 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 OR5K2Q8NHB8 316 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 EEF1AKMT1Q8WVE0 214 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 RSC1A1Q92681 617 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 ATXN7L3BQ96GX2 97 aa13.37□□□□□ -0.27
VRK3-219ENST00000600137 VPS39Q96JC1 886 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms