RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 OR52E1Q8NGJ3 308 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 SGSM3Q96HU1 749 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 RBM41Q96IZ5 413 aaKnown RBP10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 TRAPPC9Q96Q05 1148 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 FCRL5Q96RD9 977 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 FSD1LQ9BXM9 530 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 SLC29A3Q9BZD2 475 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 XPO4Q9C0E2 1151 aaKnown RBP10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 TRABDQ9H4I3 376 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 SMOXQ9NWM0 555 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 DHCR7Q9UBM7 475 aaKnown RBP10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 PLAGL1Q9UM63 463 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 CDYLQ9Y232 598 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 DNMT3AQ9Y6K1 912 aaPredicted RBP10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 NOTCH2Q04721 2471 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 ANKUB1A6NFN9 424 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 WIPF3A6NGB9 483 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 ZNF487B1APH4 448 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 E7EQ34 232 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 AKR1B10O60218 316 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 ZFXP17010 805 aaPredicted RBP10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 RBL1P28749 1068 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 GLRBP48167 497 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 BCL7AQ4VC05 210 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 ODF2Q5BJF6 829 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 VWA5B1Q5TIE3 1220 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 MED25Q71SY5 747 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 CUZD1Q86UP6 607 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 ADGRF3Q8IZF5 1079 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 TMEM102Q8N9M5 508 aaPredicted RBP10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 ACVR1CQ8NER5 493 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 OR8K5Q8NH50 307 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 SRPK1Q96SB4 655 aaKnown RBP10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 MESP1Q9BRJ9 268 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 HEMGNQ9BXL5 484 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 OR52A5Q9H2C5 316 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 ZNF552Q9H707 407 aaPredicted RBP10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 COG4Q9H9E3 785 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 FANCEQ9HB96 536 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 C1GALT1Q9NS00 363 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 SPHK1Q9NYA1 384 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 ACTR10Q9NZ32 417 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 HACD3Q9P035 362 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 CRLS1Q9UJA2 301 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 ACSL5Q9ULC5 683 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 KLHL20Q9Y2M5 609 aa10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 PTRH2Q9Y3E5 179 aaKnown RBP10.85□□□□□ -0.67
PRKCSH-220ENST00000593104 CCDC78A2IDD5 438 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 SPOPO43791 374 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 DDAH2O95865 285 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 EPOP01588 193 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 PRF1P14222 555 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 PSMB4P28070 264 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 GABRA4P48169 554 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 PRLHRP49683 370 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 MPP3Q13368 585 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 MSLNQ13421 630 aaPredicted RBP10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 BRD3Q15059 726 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 HIF1AQ16665 826 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 ZNF658BQ4V348 819 aaPredicted RBP10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 C1QL3Q5VWW1 255 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 ZDHHC20Q5W0Z9 365 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 VSIG1Q86XK7 387 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 RAB43Q86YS6 212 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 IQCKQ8N0W5 287 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 DTWD1Q8N5C7 304 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 ZNF655Q8N720 491 aaPredicted RBP10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 DTX3LQ8TDB6 740 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 P3H4Q92791 437 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 LINC00615Q96LM1 132 aaPredicted RBP10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 C5orf34Q96MH7 638 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 QKIQ96PU8 341 aaKnown RBP eCLIP10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 PITPNM3Q9BZ71 974 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 ILKAPQ9H0C8 392 aaPredicted RBP10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 PIH1D1Q9NWS0 290 aaKnown RBP10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 P4HTMQ9NXG6 502 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 CIDEBQ9UHD4 219 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 ICKQ9UPZ9 632 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 B3GNT3Q9Y2A9 372 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 PCDHGB7Q9Y5F8 929 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 PRSS21Q9Y6M0 314 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 COLEC10Q9Y6Z7 277 aa10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 RP1L1Q8IWN7 2480 aaPredicted RBP10.84□□□□□ -0.67
PRKCSH-220ENST00000593104 DOCK10Q96BY6 2186 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 hCG_1818297A0A087WSY0 165 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 C9J4A7 227 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 H3BMH7 237 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 UMODP07911 640 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 TPBGLP0DKB5 382 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 UGT2B7P16662 529 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 NDUFS1P28331 727 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 ANP32AP39687 249 aaKnown RBP10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 ARHGAP25P42331 645 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 NR2C2P49116 596 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 RRADP55042 308 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 SRSF11Q05519 484 aaKnown RBP10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 TAF1AQ15573 450 aaPredicted RBP10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 TAZQ16635 292 aa10.83□□□□□ -0.68
PRKCSH-220ENST00000593104 CRB2Q5IJ48 1285 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms