RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 ASF1AQ9Y294 204 aa13.73□□□□□ -0.21
CLPTM1-210ENST00000589158 PCDHGA3Q9Y5H0 932 aa13.73□□□□□ -0.21
CLPTM1-210ENST00000589158 B3GALT1Q9Y5Z6 326 aa13.73□□□□□ -0.21
CLPTM1-210ENST00000589158 APC2O95996 2303 aa13.73□□□□□ -0.21
CLPTM1-210ENST00000589158 DSPP15924 2871 aaKnown RBP13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 BHMG1C9JSJ3 638 aaPredicted RBP13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 POLR1CO15160 346 aaPredicted RBP13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 APOA4P06727 396 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 LIPCP11150 499 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 POLR2CP19387 275 aaPredicted RBP13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 CD82P27701 267 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 FMO4P31512 558 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 MAGEA3P43357 314 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 ARL4DP49703 201 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 UCNP55089 124 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 CXADRP78310 365 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 PRKAA1Q13131 559 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 THOC5Q13769 683 aaKnown RBP13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 TMED2Q15363 201 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 RNF187Q5TA31 235 aaPredicted RBP13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 CEACAM20Q6UY09 585 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 SYT10Q6XYQ8 523 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 PRSS42Q7Z5A4 293 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 OR52E1Q8NGJ3 308 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 OR5AR1Q8NGP9 310 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 GSDMBQ8TAX9 411 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 LKAAEAR1Q8TD35 194 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 ASZ1Q8WWH4 475 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 STAMBPL1Q96FJ0 436 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 SIGLEC10Q96LC7 697 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 PANX3Q96QZ0 392 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 TCF12Q99081 682 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 P2RY12Q9H244 342 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 TRIT1Q9H3H1 467 aaKnown RBP13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 XKR8Q9H6D3 395 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 APMAPQ9HDC9 416 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 FBXO8Q9NRD0 319 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 IL1RAPL1Q9NZN1 696 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 RALYQ9UKM9 306 aaKnown RBP13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 TDRKHQ9Y2W6 561 aaKnown RBP13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 CELSR3Q9NYQ7 3312 aa13.72□□□□□ -0.21
CLPTM1-210ENST00000589158 PKD1L2Q7Z442 2459 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 IGHV5-51A0A0C4DH38 117 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 GSAPA4D1B5 854 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 STMND1H3BQB6 276 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 TTI1O43156 1089 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 OGNP20774 298 aaKnown RBP13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 RPS3P23396 243 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 ACADLP28330 430 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 TMPRSS3P57727 454 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 ETF1P62495 437 aaKnown RBP13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 SH3BP2P78314 561 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 ABRQ12979 859 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 TYSND1Q2T9J0 566 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 DNAJC21Q5F1R6 531 aaKnown RBP13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 TMEM135Q86UB9 458 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 HOOK3Q86VS8 718 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 AMIGO1Q86WK6 493 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 AGGF1Q8N302 714 aaeCLIP13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 CFAP61Q8NHU2 1237 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 KLHL6Q8WZ60 621 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 UBXN4Q92575 508 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 LPGAT1Q92604 370 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 ELMO2Q96JJ3 720 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 TEFMQ96QE5 360 aaKnown RBP13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 OR6C1Q96RD1 312 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 KRT12Q99456 494 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 CD180Q99467 661 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 NRTNQ99748 197 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 MAP3K3Q99759 626 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 TRIM51Q9BSJ1 452 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 TRIM31Q9BZY9 425 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 TFB2MQ9H5Q4 396 aaKnown RBP13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 CPNE5Q9HCH3 593 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 C20orf96Q9NUD7 363 aaPredicted RBP13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 CRYL1Q9Y2S2 319 aa13.71□□□□□ -0.21
CLPTM1-210ENST00000589158 LAMA5O15230 3695 aa13.71□□□□□ -0.22
CLPTM1-210ENST00000589158 ZFHX4Q86UP3 3567 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 ZCWPW2A0A1B0GU75 182 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 TLCD2A6NGC4 264 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 USP1O94782 785 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 NELFEP18615 380 aaKnown RBP13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 IVDP26440 423 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 AOAHP28039 575 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 DHX9Q08211 1270 aaKnown RBP13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 LONRF1Q17RB8 773 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 BBS9Q3SYG4 887 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 CTSL3PQ5NE16 218 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 ZNF470Q6ECI4 717 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 CCDC81Q6ZN84 652 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 OTOAQ7RTW8 1153 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 CILP2Q8IUL8 1156 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 VRK3Q8IV63 474 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 TBC1D21Q8IYX1 336 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 SLC22A15Q8IZD6 547 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 SIDT2Q8NBJ9 832 aaKnown RBP13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 SKA2Q8WVK7 121 aaPredicted RBP13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 CCNL2Q96S94 520 aaPredicted RBP13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 ZPBPQ9BS86 351 aa13.7□□□□□ -0.22
CLPTM1-210ENST00000589158 PRORYQ9H606 182 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms