RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MR1Q95460 341 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 CDKN2AIPNLQ96HQ2 116 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 C19orf43Q9BQ61 176 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 KLHL25Q9H0H3 589 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 XKR8Q9H6D3 395 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 SMARCAL1Q9NZC9 954 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 ANAPC2Q9UJX6 822 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 TLK1Q9UKI8 766 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 BTRCQ9Y297 605 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 MAN2B2Q9Y2E5 1009 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 PRSS21Q9Y6M0 314 aa13.94□□□□□ -0.18
VMP1-206ENST00000587945 MIF4GDA9UHW6 222 aaKnown RBP13.93□□□□□ -0.18
VMP1-206ENST00000587945 H7C0S8 307 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 IFRD1O00458 451 aaPredicted RBP13.93□□□□□ -0.18
VMP1-206ENST00000587945 BTN3A1O00481 513 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 CPNE3O75131 537 aaKnown RBP13.93□□□□□ -0.18
VMP1-206ENST00000587945 ZNF189O75820 626 aaPredicted RBP13.93□□□□□ -0.18
VMP1-206ENST00000587945 AP2A1O95782 977 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 PVRP15151 417 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 ST6GAL1P15907 406 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 PTPN4P29074 926 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 PRDX3P30048 256 aaKnown RBP13.93□□□□□ -0.18
VMP1-206ENST00000587945 CACNG1Q06432 222 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 KIF5AQ12840 1032 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 ABRQ12979 859 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 NAPRTQ6XQN6 538 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 SYCE1Q8N0S2 351 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 OR52E1Q8NGJ3 308 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 STYXQ8WUJ0 223 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 TFGQ92734 400 aaPredicted RBP13.93□□□□□ -0.18
VMP1-206ENST00000587945 HGH1Q9BTY7 390 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 TRIM55Q9BYV6 548 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 CHST8Q9H2A9 424 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 CAPN6Q9Y6Q1 641 aa13.93□□□□□ -0.18
VMP1-206ENST00000587945 MKRN2OSH3BPM6 223 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 RFPL1O75677 317 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 PDGFAP04085 211 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 LMAN1P49257 510 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 PMS2P54278 862 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 RPS15P62841 145 aaKnown RBP13.92□□□□□ -0.18
VMP1-206ENST00000587945 CHAF1BQ13112 559 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 IL10RAQ13651 578 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 LAMB3Q13751 1172 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 BRD3Q15059 726 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 P3H1Q32P28 736 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 PLEKHS1Q5SXH7 462 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 FAM69BQ5VUD6 431 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 CPZQ66K79 652 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 SPC24Q8NBT2 197 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 OR52K1Q8NGK4 314 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 OR8K5Q8NH50 307 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 OR1L3Q8NH93 324 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 ALS2CR12Q96Q35 445 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 GPR87Q9BY21 358 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 VPS37BQ9H9H4 285 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 C1GALT1Q9NS00 363 aa13.92□□□□□ -0.18
VMP1-206ENST00000587945 FARSAQ9Y285 508 aaKnown RBP13.92□□□□□ -0.18
VMP1-206ENST00000587945 CCDC162PA2VCL2 907 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 MROH6A6NGR9 719 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 TMEM150CB9EJG8 249 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 RECKO95980 971 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 MSNP26038 577 aaKnown RBP13.91□□□□□ -0.18
VMP1-206ENST00000587945 CD151P48509 253 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 FOXK1P85037 733 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 RPA4Q13156 261 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 SEMA5AQ13591 1074 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 BOP1Q14137 746 aaKnown RBP13.91□□□□□ -0.18
VMP1-206ENST00000587945 UGT8Q16880 541 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 ZNF789Q5FWF6 425 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 TCTN3Q6NUS6 607 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 ZNF449Q6P9G9 518 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 ASB18Q6ZVZ8 466 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 PRUNE1Q86TP1 453 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 TRIM73Q86UV7 250 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 AMIGO1Q86WK6 493 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 ADGRF3Q8IZF5 1079 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 CARFQ8N187 725 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 OR5AR1Q8NGP9 310 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 HES6Q96HZ4 224 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 TFB2MQ9H5Q4 396 aaKnown RBP13.91□□□□□ -0.18
VMP1-206ENST00000587945 MVB12BQ9H7P6 319 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 FANCEQ9HB96 536 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 ETNK1Q9HBU6 452 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 LATS2Q9NRM7 1088 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 ACTR10Q9NZ32 417 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 SLC2A6Q9UGQ3 507 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 ICKQ9UPZ9 632 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 PLAAQ9Y263 795 aa13.91□□□□□ -0.18
VMP1-206ENST00000587945 ARGFXA6NJG6 315 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 MEN1O00255 615 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 MATN2O00339 956 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 PSMD3O43242 534 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 OR1I1O60431 355 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 AP2A2O94973 939 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 IFNB1P01574 187 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 KLK3P07288 261 aaPredicted RBP13.9□□□□□ -0.18
VMP1-206ENST00000587945 PSMA3P25788 255 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 FOXN2P32314 431 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 GRIA1P42261 906 aa13.9□□□□□ -0.18
VMP1-206ENST00000587945 KLRB1Q12918 225 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms