RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 RSC1A1Q92681 617 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 CXorf40BQ96DE9 158 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 PGM2Q96G03 612 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 DCUN1D1Q96GG9 259 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 RMDN2Q96LZ7 410 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 DCBLD2Q96PD2 775 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 CAPS2Q9BXY5 557 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 DPH1Q9BZG8 443 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 ROPN1BQ9BZX4 212 aaPredicted RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 IL22Q9GZX6 179 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 OR52A5Q9H2C5 316 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 CNOT10Q9H9A5 744 aaKnown RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 COG4Q9H9E3 785 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 PPCSQ9HAB8 311 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 ROPN1Q9HAT0 212 aaPredicted RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 MRM3Q9HC36 420 aaKnown RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 SIDT1Q9NXL6 827 aaKnown RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 SEMA5BQ9P283 1151 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 EPHA6Q9UF33 1036 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 PISDQ9UG56 409 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 PSMD13Q9UNM6 376 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 PCDHGA3Q9Y5H0 932 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 NFS1Q9Y697 457 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 CCDC78A2IDD5 438 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 B4E171 279 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 QSOX1O00391 747 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 DNALI1O14645 258 aaPredicted RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 RRP8O43159 456 aaKnown RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 PRAMEF10O60809 474 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 UBXN7O94888 489 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 GOT2P00505 430 aaKnown RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 ABHD2P08910 425 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 SLC35G4P0C7Q5 338 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 JMJD7P0C870 316 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 FGF3P11487 239 aaPredicted RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CCL4P13236 92 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 IVDP26440 423 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 ARNTP27540 789 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 TSPAN7P41732 249 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CD151P48509 253 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 NPY2RP49146 381 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 GYS2P54840 703 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 GFERP55789 205 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CRADDP78560 199 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 RPA4Q13156 261 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CLN3Q13286 438 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 KCTD19Q17RG1 926 aaPredicted RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 ANKRD22Q5VYY1 191 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 DUS1LQ6P1R4 473 aaKnown RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 FOXR1Q6PIV2 292 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CERS6Q6ZMG9 384 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 TAOK1Q7L7X3 1001 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 PRSS42Q7Z5A4 293 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CCDC25Q86WR0 208 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 DTX1Q86Y01 620 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 TRIM48Q8IWZ4 208 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 AGBL5Q8NDL9 886 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 MCUQ8NE86 351 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 SPDYE1Q8NFV5 336 aaPredicted RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 OR4L1Q8NH43 312 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 SNRNP27Q8WVK2 155 aaKnown RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 ZFPM2Q8WW38 1151 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 KCNE4Q8WWG9 221 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CPT1BQ92523 772 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 HDAC10Q969S8 669 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 PMEPA1Q969W9 287 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 ARL8AQ96BM9 186 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CRELD1Q96HD1 420 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 AHCYL2Q96HN2 611 aaKnown RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 C9orf72Q96LT7 481 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 INSM2Q96T92 566 aaPredicted RBP8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CCDC77Q9BR77 488 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CCM2Q9BSQ5 444 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 KIFC1Q9BW19 673 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 DDA1Q9BW61 102 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 TWSG1Q9GZX9 223 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 WWP1Q9H0M0 922 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CENPHQ9H3R5 247 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 PRORYQ9H606 182 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 KIR3DX1Q9H7L2 352 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 VPS37BQ9H9H4 285 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 CHRAC1Q9NRG0 131 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 SYBUQ9NX95 663 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 FOXJ2Q9P0K8 574 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 AHCTF1Q8WYP5 2266 aa8.43□□□□□ -1.06
ATG4D-202ENST00000585437 LIN7AO14910 233 aaPredicted RBP8.42□□□□□ -1.06
ATG4D-202ENST00000585437 EIF3HO15372 352 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATG4D-202ENST00000585437 RGS16O15492 202 aaPredicted RBP8.42□□□□□ -1.06
ATG4D-202ENST00000585437 LIPCP11150 499 aa8.42□□□□□ -1.06
ATG4D-202ENST00000585437 MLNP12872 115 aa8.42□□□□□ -1.06
ATG4D-202ENST00000585437 MPSTP25325 297 aa8.42□□□□□ -1.06
ATG4D-202ENST00000585437 MGAT1P26572 445 aa8.42□□□□□ -1.06
ATG4D-202ENST00000585437 CD82P27701 267 aa8.42□□□□□ -1.06
ATG4D-202ENST00000585437 NMBRP28336 390 aa8.42□□□□□ -1.06
ATG4D-202ENST00000585437 SESN2P58004 480 aaPredicted RBP8.42□□□□□ -1.06
ATG4D-202ENST00000585437 RAB15P59190 212 aa8.42□□□□□ -1.06
ATG4D-202ENST00000585437 PRAMEP78395 509 aa8.42□□□□□ -1.06
ATG4D-202ENST00000585437 GPS1Q13098 491 aa8.42□□□□□ -1.06
ATG4D-202ENST00000585437 TRIP13Q15645 432 aaPredicted RBP8.42□□□□□ -1.06
ATG4D-202ENST00000585437 TYSND1Q2T9J0 566 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms