RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MAP3K7O43318 606 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 IPO13O94829 963 aaKnown RBP19.23■□□□□ 0.67
CCDC40-206ENST00000572083 PRAMEF1O95521 474 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 NFKB1P19838 968 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 HADHAP40939 763 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 TNNT3P45378 269 aaPredicted RBP19.23■□□□□ 0.67
CCDC40-206ENST00000572083 DEFB110Q30KQ9 67 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 FIGNQ5HY92 759 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 RFX6Q8HWS3 928 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 TMEM151BQ8IW70 566 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 CFAP206Q8IYR0 622 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 MOCOSQ96EN8 888 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 MRGPRX2Q96LB1 330 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 TRAPPC9Q96Q05 1148 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 MAK16Q9BXY0 300 aaKnown RBP19.23■□□□□ 0.67
CCDC40-206ENST00000572083 PACSIN1Q9BY11 444 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 NAT10Q9H0A0 1025 aaKnown RBP19.23■□□□□ 0.67
CCDC40-206ENST00000572083 HACD3Q9P035 362 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 UVRAGQ9P2Y5 699 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 GPN3Q9UHW5 284 aaPredicted RBP19.23■□□□□ 0.67
CCDC40-206ENST00000572083 ENTPD4Q9Y227 616 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 OSGIN2Q9Y236 505 aa19.23■□□□□ 0.67
CCDC40-206ENST00000572083 CCDC88CQ9P219 2028 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 SEC16AO15027 2179 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 E2F3O00716 465 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 ZG16O60844 167 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 HBQ1P09105 142 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 ZRSR2Q15696 482 aaKnown RBP19.22■□□□□ 0.67
CCDC40-206ENST00000572083 SLC1A5Q15758 541 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 BCL7AQ4VC05 210 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 GPR135Q8IZ08 494 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 ZNF398Q8TD17 642 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 SYN2Q92777 582 aaPredicted RBP19.22■□□□□ 0.67
CCDC40-206ENST00000572083 FERD3LQ96RJ6 166 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 CDYLQ9Y232 598 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 HEBP2Q9Y5Z4 205 aa19.22■□□□□ 0.67
CCDC40-206ENST00000572083 A0A1W2PQJ5 194 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 ZNF487B1APH4 448 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 SGTAO43765 313 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 KLHL41O60662 606 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 CNOT3O75175 753 aaKnown RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 KRT1P04264 644 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 PER3P56645 1201 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 RIPPLY3P57055 190 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 MESDQ14696 234 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 NR1I3Q14994 352 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 PRKD1Q15139 912 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 HIF1AQ16665 826 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 CYP2A13Q16696 494 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 KCNMB4Q86W47 210 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 IPMKQ8NFU5 416 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 OR52E1Q8NGJ3 308 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 CPLX3Q8WVH0 158 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 CTNNBL1Q8WYA6 563 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 N4BP2L2Q92802 583 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 OXNAD1Q96HP4 312 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 RBM41Q96IZ5 413 aaKnown RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 LINC00615Q96LM1 132 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 WDR77Q9BQA1 342 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 C17orf62Q9BQA9 187 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 IFT80Q9P2H3 777 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 SAE1Q9UBE0 346 aaPredicted RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 NDOR1Q9UHB4 597 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 NENFQ9UMX5 172 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 NOVA2Q9UNW9 492 aaKnown RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 ARL5AQ9Y689 179 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 C2CD3Q4AC94 2353 aa19.21■□□□□ 0.67
CCDC40-206ENST00000572083 MDC1Q14676 2089 aaKnown RBP19.21■□□□□ 0.67
CCDC40-206ENST00000572083 PDZD2O15018 2839 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 PCM1Q15154 2024 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 KLHL33A6NCF5 533 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 SMTNL1A8MU46 457 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 STX7O15400 261 aaKnown RBP19.2■□□□□ 0.66
CCDC40-206ENST00000572083 HCRTR1O43613 425 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 ALOX12BO75342 701 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 SERPINC1P01008 464 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 IGHEP01854 428 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 H2AFZP0C0S5 128 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 ZFXP17010 805 aaPredicted RBP19.2■□□□□ 0.66
CCDC40-206ENST00000572083 GRNP28799 593 aaKnown RBP19.2■□□□□ 0.66
CCDC40-206ENST00000572083 WASHC5Q12768 1159 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 CLEC17AQ6ZS10 378 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 H2AFVQ71UI9 128 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 PPP1R32Q7Z5V6 425 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 TRIM73Q86UV7 250 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 MCEMP1Q8IX19 187 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 OR2Y1Q8NGV0 311 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 HM13Q8TCT9 377 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 BPIFA3Q9BQP9 254 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 CCM2Q9BSQ5 444 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 XKR8Q9H6D3 395 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 ASB8Q9H765 288 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 FAM60AQ9NP50 221 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 DHCR7Q9UBM7 475 aaKnown RBP19.2■□□□□ 0.66
CCDC40-206ENST00000572083 POLQO75417 2590 aa19.2■□□□□ 0.66
CCDC40-206ENST00000572083 CCDC66A2RUB6 948 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 PRSS44E7EML9 344 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 OR2B3O76000 313 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 CTSBP07858 339 aa19.19■□□□□ 0.66
CCDC40-206ENST00000572083 UMODP07911 640 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms