RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 P2RY12Q9H244 342 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 ZNF768Q9H5H4 540 aaKnown RBP12.34□□□□□ -0.43
TVP23B-204ENST00000571018 PRORYQ9H606 182 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 HRASLS2Q9NWW9 162 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 SIDT1Q9NXL6 827 aaKnown RBP12.34□□□□□ -0.43
TVP23B-204ENST00000571018 SAMD15Q9P1V8 674 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 ASIC3Q9UHC3 531 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 B3GALT1Q9Y5Z6 326 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 ADAMTS20P59510 1910 aa12.34□□□□□ -0.43
TVP23B-204ENST00000571018 WDFY3Q8IZQ1 3526 aa12.33□□□□□ -0.43
TVP23B-204ENST00000571018 IQCF5A8MTL0 148 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
TVP23B-204ENST00000571018 CCDC188H7C350 402 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 DNALI1O14645 258 aaPredicted RBP12.33□□□□□ -0.44
TVP23B-204ENST00000571018 GPC4O75487 556 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 NDUFS3O75489 264 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 RASSF9O75901 435 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 RPS3P23396 243 aaKnown RBP eCLIP12.33□□□□□ -0.44
TVP23B-204ENST00000571018 IVDP26440 423 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 CCR7P32248 378 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 PPP1CAP62136 330 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 BRD3Q15059 726 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 TGIF1Q15583 401 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 TYSND1Q2T9J0 566 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 ANKRD20A4Q4UJ75 823 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 SYTL3Q4VX76 610 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 CACHD1Q5VU97 1274 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 ANKS6Q68DC2 871 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 NAPRTQ6XQN6 538 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 FAM92BQ6ZTR7 304 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 PCGF5Q86SE9 256 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 SDCCAG8Q86SQ7 713 aaPredicted RBP12.33□□□□□ -0.44
TVP23B-204ENST00000571018 OOSP2Q86WS3 158 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 LRRC6Q86X45 466 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 ZFAND4Q86XD8 727 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 KLHL7Q8IXQ5 586 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 OR4E2Q8NGC2 313 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 ASZ1Q8WWH4 475 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 UBXN4Q92575 508 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 SIGLEC10Q96LC7 697 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 FCRL3Q96P31 734 aaPredicted RBP12.33□□□□□ -0.44
TVP23B-204ENST00000571018 TCF12Q99081 682 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 CD180Q99467 661 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 TRIM56Q9BRZ2 755 aaKnown RBP12.33□□□□□ -0.44
TVP23B-204ENST00000571018 ZPBPQ9BS86 351 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 TFB2MQ9H5Q4 396 aaKnown RBP12.33□□□□□ -0.44
TVP23B-204ENST00000571018 CDYLQ9Y232 598 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 BPTFQ12830 3046 aa12.33□□□□□ -0.44
TVP23B-204ENST00000571018 DMXL2Q8TDJ6 3036 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 ZCWPW2A0A1B0GU75 182 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 OR6C74A6NCV1 312 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 GOLGA8KD6RF30 607 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 STMND1H3BQB6 276 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 GOLGA8TH3BQL2 631 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 POLR1CO15160 346 aaPredicted RBP12.32□□□□□ -0.44
TVP23B-204ENST00000571018 PFDN6O15212 129 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 ITGB6P18564 788 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 NELFEP18615 380 aaKnown RBP12.32□□□□□ -0.44
TVP23B-204ENST00000571018 OGNP20774 298 aaKnown RBP12.32□□□□□ -0.44
TVP23B-204ENST00000571018 SEPHS1P49903 392 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 ADARP55265 1226 aaKnown RBP12.32□□□□□ -0.44
TVP23B-204ENST00000571018 TMPRSS3P57727 454 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 DR1Q01658 176 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 HSPA14Q0VDF9 509 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 DHX34Q14147 1143 aaKnown RBP12.32□□□□□ -0.44
TVP23B-204ENST00000571018 RNF187Q5TA31 235 aaPredicted RBP12.32□□□□□ -0.44
TVP23B-204ENST00000571018 PTRHD1Q6GMV3 140 aaKnown RBP12.32□□□□□ -0.44
TVP23B-204ENST00000571018 NEPROQ6NW34 567 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 ARMC6Q6NXE6 501 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 CEACAM20Q6UY09 585 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 HOOK3Q86VS8 718 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 TBC1D21Q8IYX1 336 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 SLC22A15Q8IZD6 547 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 KRT222Q8N1A0 295 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 AGGF1Q8N302 714 aaeCLIP12.32□□□□□ -0.44
TVP23B-204ENST00000571018 OTUD6BQ8N6M0 293 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 OR52E1Q8NGJ3 308 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 LKAAEAR1Q8TD35 194 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 LCN9Q8WX39 176 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 ZNF669Q96BR6 464 aaPredicted RBP12.32□□□□□ -0.44
TVP23B-204ENST00000571018 SLC41A2Q96JW4 573 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 PANX3Q96QZ0 392 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 MAP3K3Q99759 626 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 SPRY4Q9C004 299 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 SRMSQ9H3Y6 488 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 APMAPQ9HDC9 416 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 GNPTGQ9UJJ9 305 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 ASF1AQ9Y294 204 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 PCDHB11Q9Y5F2 797 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 MAD1L1Q9Y6D9 718 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 RPS6KL1Q9Y6S9 549 aa12.32□□□□□ -0.44
TVP23B-204ENST00000571018 IGHV5-51A0A0C4DH38 117 aa12.31□□□□□ -0.44
TVP23B-204ENST00000571018 UBA6A0AVT1 1052 aaPredicted RBP12.31□□□□□ -0.44
TVP23B-204ENST00000571018 TLCD2A6NGC4 264 aa12.31□□□□□ -0.44
TVP23B-204ENST00000571018 MATN2O00339 956 aa12.31□□□□□ -0.44
TVP23B-204ENST00000571018 KPNA5O15131 536 aa12.31□□□□□ -0.44
TVP23B-204ENST00000571018 USP1O94782 785 aa12.31□□□□□ -0.44
TVP23B-204ENST00000571018 SLCO2B1O94956 709 aa12.31□□□□□ -0.44
TVP23B-204ENST00000571018 APOA4P06727 396 aa12.31□□□□□ -0.44
TVP23B-204ENST00000571018 POLR2CP19387 275 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms