RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MCOLN3Q8TDD5 553 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 RHBDF1Q96CC6 855 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 CLPTM1LQ96KA5 538 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 GAS2L1Q99501 681 aaPredicted RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 MYOCQ99972 504 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 CCM2Q9BSQ5 444 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 OSBPL6Q9BZF3 934 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 CD244Q9BZW8 370 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ATG10Q9H0Y0 220 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 TUBB1Q9H4B7 451 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 NFKBIL1Q9UBC1 381 aaPredicted RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 PTBP2Q9UKA9 531 aaKnown RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 CNOT6Q9ULM6 557 aaKnown RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 GRXCR2A6NFK2 248 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ANHXE9PGG2 379 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 NUAK1O60285 661 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ADH1BP00325 375 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 OTCP00480 354 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 C8GP07360 202 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 UROSP10746 265 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 THRAP10827 490 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 EPB42P16452 691 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 PDHA2P29803 388 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 HMOX2P30519 316 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 MAT2AP31153 395 aaKnown RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 PRLHRP49683 370 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 TAS2R38P59533 333 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ERVPABLB-1P60509 514 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 STX1BP61266 288 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 TSTA3Q13630 321 aaPredicted RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 SGO1Q5FBB7 561 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 HABP4Q5JVS0 413 aaKnown RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 IER5LQ5T953 404 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 LETMD1Q6P1Q0 360 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 IL27RAQ6UWB1 636 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 PACS2Q86VP3 889 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 HEATR4Q86WZ0 1026 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ARHGAP24Q8N264 748 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 IL17RCQ8NAC3 791 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 FAM13CQ8NE31 585 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 DTX3LQ8TDB6 740 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ACTRT2Q8TDY3 377 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ASB11Q8WXH4 323 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 TMEM79Q9BSE2 394 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 C1QTNF3Q9BXJ4 246 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 TRIM39Q9HCM9 518 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ATXN10Q9UBB4 475 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 OR1A2Q9Y585 309 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ZFC3H1O60293 1989 aaKnown RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 CKAP5Q14008 2032 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3DA0A087WVF3 549 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3IA0A087WXS9 549 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3EA0A087X179 549 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3KA0A087X1G2 549 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3FA6NER0 549 aaPredicted RBP6.91□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3LB9A6J9 549 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 H3BM21 787 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 K7EPI3 171 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 OR7A17O14581 309 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 CLGNO14967 610 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 WDR47O94967 919 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3HP0C7X1 549 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 ZNF8P17098 575 aaPredicted RBP6.91□□□□□ -1.3
SMG1-215ENST00000568239 ITPKAP23677 461 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 INHBCP55103 352 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 NAA20P61599 178 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 RPS14P62263 151 aaKnown RBP6.91□□□□□ -1.3
SMG1-215ENST00000568239 SGCGQ13326 291 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 FASTKQ14296 549 aaKnown RBP6.91□□□□□ -1.3
SMG1-215ENST00000568239 GRB7Q14451 532 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 MMEL1Q495T6 779 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 DNAL1Q4LDG9 190 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 AGKQ53H12 422 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3GQ6DHY5 549 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3CQ6IPX1 549 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 GK5Q6ZS86 529 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 LARP4Q71RC2 724 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMG1-215ENST00000568239 ADGRG6Q86SQ4 1221 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D3Q8IZP1 549 aaPredicted RBP6.91□□□□□ -1.3
SMG1-215ENST00000568239 SLC44A3Q8N4M1 653 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 EFCAB3Q8N7B9 438 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 OR2T3Q8NH03 318 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 HIC2Q96JB3 615 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 FOPNLQ96NB1 174 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 ZNF382Q96SR6 550 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 SLC12A9Q9BXP2 914 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 RDH14Q9HBH5 336 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 KLHL42Q9P2K6 505 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 POLG2Q9UHN1 485 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 ZNHIT2Q9UHR6 403 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 MOSPD1Q9UJG1 213 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 C9JVG2 144 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 PSMD12O00232 456 aaPredicted RBP6.91□□□□□ -1.3
SMG1-215ENST00000568239 CFLARO15519 480 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 MGRN1O60291 552 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 ADAM23O75077 832 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 POP7O75817 140 aaKnown RBP6.91□□□□□ -1.3
SMG1-215ENST00000568239 COL9A1P20849 921 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 BDKRB1P46663 353 aa6.91□□□□□ -1.3
SMG1-215ENST00000568239 PKNOX1P55347 436 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms