RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 NR1D2Q14995 579 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 PAQR3Q6TCH7 311 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 CYS1Q717R9 158 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 SPRED1Q7Z699 444 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 SLC26A11Q86WA9 606 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 ZBTB2Q8N680 514 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 GPATCH11Q8N954 259 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 OR5AR1Q8NGP9 310 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 UBXN4Q92575 508 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 GLMNQ92990 594 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 RBBP8Q99708 897 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 RHOJQ9H4E5 214 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 SLC40A1Q9NP59 571 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 TMEM9Q9P0T7 183 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 ACSL5Q9ULC5 683 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 PLAGL1Q9UM63 463 aa9.55□□□□□ -0.88
CLK3-208ENST00000562626 SDK2Q58EX2 2172 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 IGHV1OR21-1A0A087WYE8 117 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 KIR2DS5A0A0G2JLQ3 304 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 A0A0G2JNG1 304 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 PMS2P1A4D2B8 440 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 FAM149AA5PLN7 773 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 KIR2DS3K7RE56 304 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 QSOX1O00391 747 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 NTN3O00634 580 aaPredicted RBP9.54□□□□□ -0.88
CLK3-208ENST00000562626 PHGDHO43175 533 aaKnown RBP9.54□□□□□ -0.88
CLK3-208ENST00000562626 OPA1O60313 960 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 RFPL3O75679 317 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 TSPAN12O95859 305 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 SHBGP04278 402 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 SAT1P21673 171 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 ALDH4A1P30038 563 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 STX2P32856 288 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 BDKRB1P46663 353 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 RPA4Q13156 261 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 PRKG2Q13237 762 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 SLC29A2Q14542 456 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 KIR2DS5Q14953 304 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 KLHL38Q2WGJ6 581 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 SYTL3Q4VX76 610 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 WDR93Q6P2C0 686 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 ZNF449Q6P9G9 518 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 CYHR1Q6ZMK1 362 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 ZNF574Q6ZN55 896 aaPredicted RBP9.54□□□□□ -0.88
CLK3-208ENST00000562626 TMEM26Q6ZUK4 368 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 OTOAQ7RTW8 1153 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 PIWIL4Q7Z3Z4 852 aaKnown RBP9.54□□□□□ -0.88
CLK3-208ENST00000562626 CMC1Q7Z7K0 106 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 B3GNT8Q7Z7M8 397 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 RASGRP3Q8IV61 690 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 EIF1ADQ8N9N8 165 aaKnown RBP9.54□□□□□ -0.88
CLK3-208ENST00000562626 CFAP61Q8NHU2 1237 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 EEF1AKMT1Q8WVE0 214 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 ANKRD49Q8WVL7 239 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 RSC1A1Q92681 617 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 DLG3Q92796 817 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 KCNJ9Q92806 393 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 TMEM159Q96B96 161 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 CXorf40BQ96DE9 158 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 ELMO2Q96JJ3 720 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 PANX3Q96QZ0 392 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 GPR22Q99680 433 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 CPNE1Q99829 537 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 NUDT22Q9BRQ3 303 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 HGH1Q9BTY7 390 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 MENTQ9BUN1 341 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 UNKQ9C0B0 810 aaKnown RBP9.54□□□□□ -0.88
CLK3-208ENST00000562626 RDH14Q9HBH5 336 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 SLC24A2Q9UI40 661 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 ADAMTS6Q9UKP5 1117 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 RAB21Q9UL25 225 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 WASF3Q9UPY6 502 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 VPS9D1Q9Y2B5 631 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 DHRS7Q9Y394 339 aa9.54□□□□□ -0.88
CLK3-208ENST00000562626 SCN2AQ99250 2005 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 MAP1BP46821 2468 aaKnown RBP9.53□□□□□ -0.88
CLK3-208ENST00000562626 OR5K4A6NMS3 321 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 RHPN2P1A8MT19 583 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 FOXO6A8MYZ6 492 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 E5RI56 91 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 POC1B-GALNT4F8VUJ3 575 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 H3BMM5 538 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 AGRPO00253 132 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 VPS26AO75436 327 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 SPAG6O75602 509 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 MATN4O95460 622 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 VIPP01282 170 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 RPLP0P05388 317 aaKnown RBP9.53□□□□□ -0.88
CLK3-208ENST00000562626 APOA4P06727 396 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 GSTM1P09488 218 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 TYRP1P17643 537 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 SPINK2P20155 84 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 MPSTP25325 297 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 CD1CP29017 333 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 GP5P40197 560 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 HALP42357 657 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 MAPK9P45984 424 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 RPIAP49247 311 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 CSRP3P50461 194 aa9.53□□□□□ -0.88
CLK3-208ENST00000562626 LIMK2P53671 638 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms