RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 HEMK1Q9Y5R4 338 aaPredicted RBP10.01□□□□□ -0.81
CLK3-205ENST00000561673 COL6A6A6NMZ7 2263 aa10.01□□□□□ -0.81
CLK3-205ENST00000561673 ZNF106Q9H2Y7 1883 aaKnown RBP10□□□□□ -0.81
CLK3-205ENST00000561673 CCDC162PA2VCL2 907 aa10□□□□□ -0.81
CLK3-205ENST00000561673 IFRD1O00458 451 aaPredicted RBP10□□□□□ -0.81
CLK3-205ENST00000561673 BTN3A3O00478 584 aa10□□□□□ -0.81
CLK3-205ENST00000561673 SUV39H1O43463 412 aa10□□□□□ -0.81
CLK3-205ENST00000561673 OR1I1O60431 355 aa10□□□□□ -0.81
CLK3-205ENST00000561673 KATNA1O75449 491 aa10□□□□□ -0.81
CLK3-205ENST00000561673 MT-ND3P03897 115 aa10□□□□□ -0.81
CLK3-205ENST00000561673 GSTM1P09488 218 aa10□□□□□ -0.81
CLK3-205ENST00000561673 FURINP09958 794 aa10□□□□□ -0.81
CLK3-205ENST00000561673 ZSCAN5DPP0CG00 497 aa10□□□□□ -0.81
CLK3-205ENST00000561673 PRDX3P30048 256 aaKnown RBP10□□□□□ -0.81
CLK3-205ENST00000561673 FOXN2P32314 431 aa10□□□□□ -0.81
CLK3-205ENST00000561673 NSG1P42857 185 aa10□□□□□ -0.81
CLK3-205ENST00000561673 CD151P48509 253 aa10□□□□□ -0.81
CLK3-205ENST00000561673 LMAN1P49257 510 aa10□□□□□ -0.81
CLK3-205ENST00000561673 GSDMDP57764 484 aa10□□□□□ -0.81
CLK3-205ENST00000561673 TUBB4BP68371 445 aa10□□□□□ -0.81
CLK3-205ENST00000561673 GSTM4Q03013 218 aa10□□□□□ -0.81
CLK3-205ENST00000561673 PRKG2Q13237 762 aa10□□□□□ -0.81
CLK3-205ENST00000561673 TUBB2AQ13885 445 aa10□□□□□ -0.81
CLK3-205ENST00000561673 ERV3-1Q14264 604 aa10□□□□□ -0.81
CLK3-205ENST00000561673 SIX1Q15475 284 aaPredicted RBP10□□□□□ -0.81
CLK3-205ENST00000561673 GPR19Q15760 415 aa10□□□□□ -0.81
CLK3-205ENST00000561673 CRTC2Q53ET0 693 aaPredicted RBP10□□□□□ -0.81
CLK3-205ENST00000561673 PACS1Q6VY07 963 aa10□□□□□ -0.81
CLK3-205ENST00000561673 PPP1R21Q6ZMI0 780 aa10□□□□□ -0.81
CLK3-205ENST00000561673 CARFQ8N187 725 aa10□□□□□ -0.81
CLK3-205ENST00000561673 GLIS1Q8NBF1 620 aa10□□□□□ -0.81
CLK3-205ENST00000561673 TFGQ92734 400 aaPredicted RBP10□□□□□ -0.81
CLK3-205ENST00000561673 HDAC10Q969S8 669 aa10□□□□□ -0.81
CLK3-205ENST00000561673 ZNF778Q96MU6 729 aa10□□□□□ -0.81
CLK3-205ENST00000561673 TUBB2BQ9BVA1 445 aa10□□□□□ -0.81
CLK3-205ENST00000561673 TFB2MQ9H5Q4 396 aaKnown RBP10□□□□□ -0.81
CLK3-205ENST00000561673 LZTFL1Q9NQ48 299 aa10□□□□□ -0.81
CLK3-205ENST00000561673 LHX9Q9NQ69 397 aa10□□□□□ -0.81
CLK3-205ENST00000561673 RAB6BQ9NRW1 208 aa10□□□□□ -0.81
CLK3-205ENST00000561673 TUBD1Q9UJT1 453 aa10□□□□□ -0.81
CLK3-205ENST00000561673 PCDHB3Q9Y5E6 796 aa10□□□□□ -0.81
CLK3-205ENST00000561673 COL12A1Q99715 3063 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 HEATR9A2RTY3 570 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 GSAPA4D1B5 854 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 SLC9B1P1A6NJY1 282 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 E7EVH7 732 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 BTN3A1O00481 513 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 LIN7AO14910 233 aaPredicted RBP9.99□□□□□ -0.81
CLK3-205ENST00000561673 ARHGAP6O43182 974 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 GAS8O95995 478 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 APRTP07741 180 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 ADRA1DP25100 572 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 ACADLP28330 430 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 RPL22P35268 128 aaKnown RBP9.99□□□□□ -0.81
CLK3-205ENST00000561673 PRKAA1Q13131 559 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 SEMA5AQ13591 1074 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 LAMB3Q13751 1172 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 BOP1Q14137 746 aaKnown RBP9.99□□□□□ -0.81
CLK3-205ENST00000561673 ITIH4Q14624 930 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 BRD3Q15059 726 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 CCNG2Q16589 344 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 TSTD2Q5T7W7 516 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 ZNF449Q6P9G9 518 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 FAM199XQ6PEV8 388 aaPredicted RBP9.99□□□□□ -0.81
CLK3-205ENST00000561673 NAPRTQ6XQN6 538 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 TMEM135Q86UB9 458 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 AMIGO1Q86WK6 493 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 PTRH1Q86Y79 214 aaKnown RBP9.99□□□□□ -0.81
CLK3-205ENST00000561673 ADGRF3Q8IZF5 1079 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 CCDC89Q8N998 374 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 SLC38A9Q8NBW4 561 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 OR52E1Q8NGJ3 308 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 OR4L1Q8NH43 312 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 CT55Q8WUE5 264 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 APOBEC4Q8WW27 367 aaKnown RBP9.99□□□□□ -0.81
CLK3-205ENST00000561673 ZNF501Q96CX3 271 aaPredicted RBP9.99□□□□□ -0.81
CLK3-205ENST00000561673 RANBP9Q96S59 729 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 TLR10Q9BXR5 811 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 XKR8Q9H6D3 395 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 MVB12BQ9H7P6 319 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 CASS4Q9NQ75 786 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 ASH1LQ9NR48 2969 aaKnown RBP9.99□□□□□ -0.81
CLK3-205ENST00000561673 C1GALT1Q9NS00 363 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 KCND1Q9NSA2 647 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 SOHLH2Q9NX45 425 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 PAK5Q9P286 719 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 KCND3Q9UK17 655 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 POMT2Q9UKY4 750 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 RIMKLBQ9ULI2 386 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 BTRCQ9Y297 605 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 PCDHGA6Q9Y5G7 932 aa9.99□□□□□ -0.81
CLK3-205ENST00000561673 TLN1Q9Y490 2541 aaKnown RBP9.99□□□□□ -0.81
CLK3-205ENST00000561673 RELNP78509 3460 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 SETXQ7Z333 2677 aaKnown RBP9.98□□□□□ -0.81
CLK3-205ENST00000561673 PIPSLA2A3N6 862 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 C21orf140B9A014 251 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
CLK3-205ENST00000561673 MATN2O00339 956 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 CREG1O75629 220 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 SCRG1O75711 98 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms