RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TCRBV7S3A2A0A539 114 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 TLCD2A6NGC4 264 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 CCNYL3P0C7X3 344 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 ITGB6P18564 788 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 NELFEP18615 380 aaKnown RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 POLR2CP19387 275 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 WT1P19544 449 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 COILP38432 576 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 SARNPP82979 210 aaKnown RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 PRKAA1Q13131 559 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 IL11RAQ14626 422 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 KCNJ11Q14654 390 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 LRRC8BQ6P9F7 803 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 CCDC137Q6PK04 289 aaKnown RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 NAPRTQ6XQN6 538 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 ZNF605Q86T29 641 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 LDB1Q86U70 411 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 OTUD6BQ8N6M0 293 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 SIDT2Q8NBJ9 832 aaKnown RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 PHC3Q8NDX5 983 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 COG1Q8WTW3 980 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 TFGQ92734 400 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 RNF31Q96EP0 1072 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 ELMO2Q96JJ3 720 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 MAP3K3Q99759 626 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 TSSK1BQ9BXA7 367 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 ULBP3Q9BZM4 244 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 MVB12BQ9H7P6 319 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 GPN2Q9H9Y4 310 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 PDE7BQ9NP56 450 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 TREX1Q9NSU2 369 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 MARCH4Q9P2E8 410 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 SNX12Q9UMY4 172 aa12.25□□□□□ -0.45
LRRC28-214ENST00000559433 TMEM184BQ9Y519 407 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-214ENST00000559433 GSAPA4D1B5 854 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 CD3EAPO15446 510 aaKnown RBP12.24□□□□□ -0.45
LRRC28-214ENST00000559433 DLGAP3O95886 979 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 ITGB2P05107 769 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 EBLN1P0CF75 366 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 SFTPCP11686 197 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 LIFP15018 202 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 NMBRP28336 390 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 MAGEA6P43360 314 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 TTPAP49638 278 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 KPNA2P52292 529 aaKnown RBP12.24□□□□□ -0.45
LRRC28-214ENST00000559433 CSE1LP55060 971 aaKnown RBP12.24□□□□□ -0.45
LRRC28-214ENST00000559433 PRKG2Q13237 762 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 TUBB3Q13509 450 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 LY6DQ14210 128 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 KCNAB1Q14722 419 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 CYP1B1Q16678 543 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 TMTC4Q5T4D3 741 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 ANKRD22Q5VYY1 191 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 PCSK4Q6UW60 755 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 C6orf15Q6UXA7 325 aaPredicted RBP12.24□□□□□ -0.45
LRRC28-214ENST00000559433 KMT5CQ86Y97 462 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 ESX1Q8N693 406 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 OR52E1Q8NGJ3 308 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 ACTRT1Q8TDG2 376 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 TTC9Q92623 222 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 SLC41A2Q96JW4 573 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 KIFC1Q9BW19 673 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 SPRY4Q9C004 299 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 MRM3Q9HC36 420 aaKnown RBP12.24□□□□□ -0.45
LRRC28-214ENST00000559433 SOHLH2Q9NX45 425 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 SEMA5BQ9P283 1151 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 ASF1AQ9Y294 204 aa12.24□□□□□ -0.45
LRRC28-214ENST00000559433 SLC5A10A0PJK1 596 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 USP27XA6NNY8 438 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 ZNF891A8MT65 544 aaPredicted RBP12.23□□□□□ -0.45
LRRC28-214ENST00000559433 MATN2O00339 956 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 BTN3A1O00481 513 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 CES2O00748 559 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 ZNF185O15231 689 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 PHF2O75151 1096 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 AVILO75366 819 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 TMEM63AO94886 807 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 VAPBO95292 243 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 ZBTB11O95625 1053 aaPredicted RBP12.23□□□□□ -0.45
LRRC28-214ENST00000559433 FGF5P12034 268 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 FOLR1P15328 257 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 ZNF28P17035 718 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 CDH3P22223 829 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 HSD11B2P80365 405 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 MC1RQ01726 317 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 PLOD1Q02809 727 aaPredicted RBP12.23□□□□□ -0.45
LRRC28-214ENST00000559433 ABHD18Q0P651 414 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 CASC4Q6P4E1 433 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 CES3Q6UWW8 571 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 TIPARPQ7Z3E1 657 aaKnown RBP12.23□□□□□ -0.45
LRRC28-214ENST00000559433 HOOK3Q86VS8 718 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 PPP1R3BQ86XI6 285 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 CARFQ8N187 725 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 MPP5Q8N3R9 675 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 OR5AR1Q8NGP9 310 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 LKAAEAR1Q8TD35 194 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 GRK7Q8WTQ7 553 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 CPT1BQ92523 772 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 EXTL1Q92935 676 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 MFSD3Q96ES6 412 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms