RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ACAD10Q6JQN1 1059 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 PLXDC2Q6UX71 529 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 Q75L30 129 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 ANO5Q75V66 913 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 ATG9AQ7Z3C6 839 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 NOTCH2NLQ7Z3S9 236 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 HEATR4Q86WZ0 1026 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 INTS12Q96CB8 462 aaKnown RBP4.64□□□□□ -1.67
PRPF39-209ENST00000556353 SMC6Q96SB8 1091 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 MAP7D2Q96T17 732 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 SEMA3CQ99985 751 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 MYH16Q9H6N6 1097 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 MAGIXQ9H6Y5 334 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 ZBTB20Q9HC78 741 aaPredicted RBP4.64□□□□□ -1.67
PRPF39-209ENST00000556353 ADPRHL2Q9NX46 363 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 OGFRQ9NZT2 677 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 COPG2Q9UBF2 871 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 ACAD8Q9UKU7 415 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 CLIC4Q9Y696 253 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 SOS1Q07889 1333 aaPredicted RBP4.64□□□□□ -1.67
PRPF39-209ENST00000556353 USP42Q9H9J4 1324 aaKnown RBP4.64□□□□□ -1.67
PRPF39-209ENST00000556353 CACNA1FO60840 1977 aa4.64□□□□□ -1.67
PRPF39-209ENST00000556353 ADAMTSL1Q8N6G6 1762 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 KANSL1LA0AUZ9 987 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 C5orf60A6NFR6 353 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 H0YIN7 160 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 PSMD14O00487 310 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 ATP2A1O14983 1001 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 SLC25A12O75746 678 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 HMOX1P09601 288 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 DPEP1P16444 411 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 GNB3P16520 340 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 CRKLP46109 303 aaKnown RBP4.63□□□□□ -1.67
PRPF39-209ENST00000556353 SLC39A6Q13433 755 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 FAM53AQ6NSI3 398 aaPredicted RBP4.63□□□□□ -1.67
PRPF39-209ENST00000556353 PACS1Q6VY07 963 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 PM20D2Q8IYS1 436 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 EMC1Q8N766 993 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 PAF1Q8N7H5 531 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 TSPYL6Q8N831 410 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 WDR20Q8TBZ3 569 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 METTL6Q8TCB7 284 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 HM13Q8TCT9 377 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 ZUFSPQ96AP4 578 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 AGXT2Q9BYV1 514 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 SCPEP1Q9HB40 452 aa4.63□□□□□ -1.67
PRPF39-209ENST00000556353 RANGRFQ9HD47 186 aaPredicted RBP4.63□□□□□ -1.67
PRPF39-209ENST00000556353 CWC15Q9P013 229 aaKnown RBP4.63□□□□□ -1.67
PRPF39-209ENST00000556353 COL4A5P29400 1685 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 NR5A2O00482 541 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 EXTL3O43909 919 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 KCNK5O95279 499 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 IPO7O95373 1038 aaKnown RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 TFAP2AP05549 437 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 MSH3P20585 1137 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 HOXA13P31271 388 aaPredicted RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 ICAM3P32942 547 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 MRPS34P82930 218 aaKnown RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 TMEM115Q12893 351 aaPredicted RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 CSTF3Q12996 717 aaKnown RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 MTHFSDQ2M296 383 aaKnown RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 NSUN5P2Q63ZY6 315 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 SDCCAG8Q86SQ7 713 aaPredicted RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 SMAP1Q8IYB5 467 aaPredicted RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 TMTC2Q8N394 836 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 GBGT1Q8N5D6 347 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 ZNF473Q8WTR7 871 aaKnown RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 SECISBP2LQ93073 1101 aaKnown RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 RRP36Q96EU6 259 aaKnown RBP4.62□□□□□ -1.67
PRPF39-209ENST00000556353 TMEM39BQ9GZU3 492 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 PIGMQ9H3S5 423 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 PDP2Q9P2J9 529 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 FBXW11Q9UKB1 542 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 SCN4AP35499 1836 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 CEMIPQ8WUJ3 1361 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 NPC1L1Q9UHC9 1359 aa4.62□□□□□ -1.67
PRPF39-209ENST00000556353 COL4A1P02462 1669 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 LTBP1Q14766 1721 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 DDX60Q8IY21 1712 aaKnown RBP4.61□□□□□ -1.67
PRPF39-209ENST00000556353 NPIPB15A6NHN6 443 aaPredicted RBP4.61□□□□□ -1.67
PRPF39-209ENST00000556353 DUXAA6NLW8 204 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 C15orf62A8K5M9 175 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 TGFB1I1O43294 461 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 MLYCDO95822 493 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 TSHBP01222 138 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 HSP90AB1P08238 724 aaKnown RBP4.61□□□□□ -1.67
PRPF39-209ENST00000556353 KRT19P08727 400 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 CD48P09326 243 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 ADIPOQQ15848 244 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 DUOXA1Q1HG43 343 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 GORABQ5T7V8 394 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 SLC5A8Q8N695 610 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 ZNF599Q96NL3 588 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 RAD21L1Q9H4I0 556 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 SLC38A7Q9NVC3 462 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 INTS10Q9NVR2 710 aaKnown RBP4.61□□□□□ -1.67
PRPF39-209ENST00000556353 CRYL1Q9Y2S2 319 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 LAS1LQ9Y4W2 734 aaKnown RBP4.61□□□□□ -1.67
PRPF39-209ENST00000556353 PDE4DIPQ5VU43 2346 aa4.61□□□□□ -1.67
PRPF39-209ENST00000556353 ZNF646O15015 1829 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms