RNA–Protein interactions for RNA: ENST00000550559.5

TSFM-210, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 5 BASIC

Gene TSFM, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-210ENST00000550559 CASC4Q6P4E1 433 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 SDCCAG8Q86SQ7 713 aaPredicted RBP16.03■□□□□ 0.16
TSFM-210ENST00000550559 VASH2Q86V25 355 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 LRRC6Q86X45 466 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 OR4E2Q8NGC2 313 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 NKD1Q969G9 470 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 KIAA1143Q96AT1 154 aaPredicted RBP16.03■□□□□ 0.16
TSFM-210ENST00000550559 PANX3Q96QZ0 392 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 OR6C1Q96RD1 312 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 MAP3K3Q99759 626 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 HGH1Q9BTY7 390 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 EFHD1Q9BUP0 239 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 TFB2MQ9H5Q4 396 aaKnown RBP16.03■□□□□ 0.16
TSFM-210ENST00000550559 APMAPQ9HDC9 416 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 GNPTGQ9UJJ9 305 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 PILRAQ9UKJ1 303 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 ASF1AQ9Y294 204 aa16.03■□□□□ 0.16
TSFM-210ENST00000550559 TMEM184BQ9Y519 407 aaPredicted RBP16.03■□□□□ 0.16
TSFM-210ENST00000550559 IGHV5-51A0A0C4DH38 117 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 TCRBV7S3A2A0A539 114 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 SLC5A10A0PJK1 596 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 TK2O00142 265 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 NDUFS3O75489 264 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 ZBTB11O95625 1053 aaPredicted RBP16.02■□□□□ 0.16
TSFM-210ENST00000550559 APOA4P06727 396 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 NMBRP28336 390 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 TERF1P54274 439 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 PPP1CAP62136 330 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 TUBB3Q13509 450 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 MAP7Q14244 749 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 BRD3Q15059 726 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 SOWAHCQ53LP3 525 aaPredicted RBP16.02■□□□□ 0.16
TSFM-210ENST00000550559 TAF1BQ53T94 588 aaPredicted RBP16.02■□□□□ 0.16
TSFM-210ENST00000550559 DNAJC21Q5F1R6 531 aaKnown RBP16.02■□□□□ 0.16
TSFM-210ENST00000550559 TMTC4Q5T4D3 741 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 RNF187Q5TA31 235 aaPredicted RBP16.02■□□□□ 0.16
TSFM-210ENST00000550559 PTRHD1Q6GMV3 140 aaKnown RBP16.02■□□□□ 0.16
TSFM-210ENST00000550559 KIAA0930Q6ICG6 404 aaPredicted RBP16.02■□□□□ 0.16
TSFM-210ENST00000550559 BPHLQ86WA6 291 aaPredicted RBP16.02■□□□□ 0.16
TSFM-210ENST00000550559 PPP1R3BQ86XI6 285 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 RASGRP3Q8IV61 690 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 TBC1D21Q8IYX1 336 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 ESX1Q8N693 406 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 MCUQ8NE86 351 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 OR52E1Q8NGJ3 308 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 CPT1BQ92523 772 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 WBP1Q96G27 269 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 CARD6Q9BX69 1037 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 ULBP3Q9BZM4 244 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 POLG2Q9UHN1 485 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 POMT2Q9UKY4 750 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 RARRES3Q9UL19 164 aa16.02■□□□□ 0.16
TSFM-210ENST00000550559 MGAQ8IWI9 3026 aa16.02■□□□□ 0.15
TSFM-210ENST00000550559 MAGEB16A2A368 324 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 GSAPA4D1B5 854 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 KPNA5O15131 536 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 MAP3K7O43318 606 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 TMEM63AO94886 807 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 VAPBO95292 243 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 DLGAP3O95886 979 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 RPN2P04844 631 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 FGF5P12034 268 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 POLR2CP19387 275 aaPredicted RBP16.01■□□□□ 0.15
TSFM-210ENST00000550559 CDH3P22223 829 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 RPS3P23396 243 aaKnown RBP eCLIP16.01■□□□□ 0.152e-8■■■■■ 45.7
TSFM-210ENST00000550559 KPNA2P52292 529 aaKnown RBP16.01■□□□□ 0.15
TSFM-210ENST00000550559 GNG11P61952 73 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 SH3BP2P78314 561 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 HSD11B2P80365 405 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 ABHD18Q0P651 414 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 SEMA3AQ14563 771 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 PPP1R7Q15435 360 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.01■□□□□ 0.15
TSFM-210ENST00000550559 AMIGO1Q86WK6 493 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 PHC3Q8NDX5 983 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 GSDMBQ8TAX9 411 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 ASZ1Q8WWH4 475 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 MFSD3Q96ES6 412 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 FCRL4Q96PJ5 515 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 TCF12Q99081 682 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 SPRY4Q9C004 299 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 C1GALT1Q9NS00 363 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 SOHLH2Q9NX45 425 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 MARCH4Q9P2E8 410 aaPredicted RBP16.01■□□□□ 0.15
TSFM-210ENST00000550559 VPS9D1Q9Y2B5 631 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 PCDHGA4Q9Y5G9 962 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 ATRXP46100 2492 aa16.01■□□□□ 0.15
TSFM-210ENST00000550559 SDR42E2A6NKP2 422 aa16■□□□□ 0.15
TSFM-210ENST00000550559 C2orf74A8MZ97 194 aa16■□□□□ 0.15
TSFM-210ENST00000550559 H3BMM5 538 aa16■□□□□ 0.15
TSFM-210ENST00000550559 ITGB6P18564 788 aa16■□□□□ 0.15
TSFM-210ENST00000550559 OGNP20774 298 aaKnown RBP16■□□□□ 0.15
TSFM-210ENST00000550559 ACADLP28330 430 aa16■□□□□ 0.15
TSFM-210ENST00000550559 SHMT2P34897 504 aa16■□□□□ 0.15
TSFM-210ENST00000550559 PRKG2Q13237 762 aa16■□□□□ 0.15
TSFM-210ENST00000550559 ANKRD22Q5VYY1 191 aa16■□□□□ 0.15
TSFM-210ENST00000550559 LDB1Q86U70 411 aaPredicted RBP16■□□□□ 0.15
TSFM-210ENST00000550559 PPIL6Q8IXY8 311 aa16■□□□□ 0.15
TSFM-210ENST00000550559 SLC22A15Q8IZD6 547 aa16■□□□□ 0.15
TSFM-210ENST00000550559 D2HGDHQ8N465 521 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms