RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 CCDC138Q96M89 665 aa14.77□□□□□ -0.05
USP28-214ENST00000545540 MAGEH1Q9H213 219 aa14.77□□□□□ -0.05
USP28-214ENST00000545540 KDELR3O43731 214 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 INMTO95050 263 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 PRSS23O95084 383 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 GLUD1P00367 558 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 F11P03951 625 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 ALPLP05186 524 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 ZXDBP98169 803 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 VAC14Q08AM6 782 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 KCNAB2Q13303 367 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 TRIM71Q2Q1W2 868 aaKnown RBP14.76□□□□□ -0.05
USP28-214ENST00000545540 AASDHQ4L235 1098 aaPredicted RBP14.76□□□□□ -0.05
USP28-214ENST00000545540 FAM98BQ52LJ0 330 aaKnown RBP14.76□□□□□ -0.05
USP28-214ENST00000545540 ANKRD26P1Q6NSI1 321 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 CCDC81Q6ZN84 652 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 PTRH1Q86Y79 214 aaKnown RBP14.76□□□□□ -0.05
USP28-214ENST00000545540 RGL4Q8IZJ4 473 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 NETO1Q8TDF5 533 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 OR52E6Q96RD3 313 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 CLEC4EQ9ULY5 219 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 NEUROG3Q9Y4Z2 214 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 MYO1GB0I1T2 1018 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 SEC24AO95486 1093 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 ZNF682O95780 498 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 FTH1P02794 183 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 TGFBR1P36897 503 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 EEFSECP57772 596 aaKnown RBP14.76□□□□□ -0.05
USP28-214ENST00000545540 PHC1P78364 1004 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 DAG1Q14118 895 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 TCTN1Q2MV58 587 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 CCNYL2Q5T2Q4 361 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 MSRB3Q8IXL7 192 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 RIMKLAQ8IXN7 391 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 APCDD1Q8J025 514 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 BPIFB1Q8TDL5 484 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 SLC13A3Q8WWT9 602 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 ACDQ96AP0 544 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 ULK4Q96C45 1275 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 DPY30Q9C005 99 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 CLPBQ9H078 707 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 EPS8L2Q9H6S3 715 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 ACTR8Q9H981 624 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 DLGAP4Q9Y2H0 992 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 TBKBP1A7MCY6 615 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 PRMT5O14744 637 aaPredicted RBP14.76□□□□□ -0.05
USP28-214ENST00000545540 DEAF1O75398 565 aaPredicted RBP14.76□□□□□ -0.05
USP28-214ENST00000545540 FMO3P31513 532 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 C21orf59P57076 290 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 TRAF3Q13114 568 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 PERM1Q5SV97 790 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 PACRGLQ8N7B6 248 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 OSCP1Q8WVF1 389 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 ISG20Q96AZ6 181 aaKnown RBP14.76□□□□□ -0.05
USP28-214ENST00000545540 BEGAINQ9BUH8 593 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 EBPLQ9BY08 206 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 ADGRE3Q9BY15 652 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 PLGRKTQ9HBL7 147 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 OLA1Q9NTK5 396 aaKnown RBP14.76□□□□□ -0.05
USP28-214ENST00000545540 RNF186Q9NXI6 227 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 CD84Q9UIB8 345 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 TANC1Q9C0D5 1861 aa14.76□□□□□ -0.05
USP28-214ENST00000545540 STX16O14662 325 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 HTR1EP28566 365 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 CA8P35219 290 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 CDKN2CP42773 168 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 ACLYP53396 1101 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 NFATC3Q12968 1075 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 GPR17Q13304 367 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 SLC14A1Q13336 389 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 CRY1Q16526 586 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 PDCD4Q53EL6 469 aaKnown RBP14.75□□□□□ -0.05
USP28-214ENST00000545540 CXorf57Q6NSI4 855 aaKnown RBP14.75□□□□□ -0.05
USP28-214ENST00000545540 TTC30BQ8N4P2 665 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 FBXO22Q8NEZ5 403 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 GTF2H4Q92759 462 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 SLC47A1Q96FL8 570 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 SCLYQ96I15 445 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 ZNF382Q96SR6 550 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 CHD7Q9P2D1 2997 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 AREL1O15033 823 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 ANKRD28O15084 1053 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 VPS4BO75351 444 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 SERPINA1P01009 418 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 FCGR1AP12314 374 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 CDH1P12830 882 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 EPHA2P29317 976 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 CDH4P55283 916 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 CD47Q08722 323 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 DDX39BQ13838 428 aaKnown RBP14.75□□□□□ -0.05
USP28-214ENST00000545540 SPCS2Q15005 226 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 ANKS3Q6ZW76 656 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 LMNTD1Q8N9Z9 388 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 FOXJ1Q92949 421 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 POPDC3Q9HBV1 291 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 ST14Q9Y5Y6 855 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 ANKRD36A6QL64 1941 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 ZNF840PA6NDX5 716 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 hCG_2039718K7EN88 272 aa14.75□□□□□ -0.05
USP28-214ENST00000545540 S100BP04271 92 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms