RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 H0YAE9 185 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 AREL1O15033 823 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 TBC1D4O60343 1298 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PRLP01236 227 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SERPINF2P08697 491 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PCMT1P22061 227 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 CD6P30203 668 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC6A4P31645 630 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 HOXD12P35452 270 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 DCTP40126 519 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC26A3P40879 764 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 MASP1P48740 699 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ISL1P61371 349 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PURAQ00577 322 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 TAF10Q12962 218 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SKIV2LQ15477 1246 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 INAQ16352 499 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SUSD1Q6UWL2 747 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 CYP4Z1Q86W10 505 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 LIX1Q8N485 282 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 TEX26Q8N6G2 289 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF513Q8N8E2 541 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF548Q8NEK5 533 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PNPT1Q8TCS8 783 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 FAR1Q8WVX9 515 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 KLHL25Q9H0H3 589 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 IPPKQ9H8X2 491 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SIAEQ9HAT2 523 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 COMMD8Q9NX08 183 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 TMEFF2Q9UIK5 374 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 MAGEL2Q9UJ55 1249 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF451Q9Y4E5 1061 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 IQCA1LA6NCM1 817 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 CLDN25C9JDP6 229 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 M0QZ92 97 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 CBX4O00257 560 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PRMT5O14744 637 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 NDUFS2O75306 463 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SH3BGRLO75368 114 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF682O95780 498 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ALPIP09923 528 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 CDKN2CP42773 168 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PHC1P78364 1004 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZXDBP98169 803 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ACVR1Q04771 509 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 CYP4F3Q08477 520 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PON2Q15165 354 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 TRIP4Q15650 581 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 TYSND1Q2T9J0 566 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 CARD16Q5EG05 197 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 GNASQ5JWF2 1037 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 GTF2H4Q92759 462 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 MUL1Q969V5 352 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PYCR2Q96C36 320 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PPP1R14BQ96C90 147 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SEPT5Q99719 369 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 RNF167Q9H6Y7 350 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ENPP5Q9UJA9 477 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ABCG2Q9UNQ0 655 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 GOLGA4Q13439 2230 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ANKRD36A6QL64 1941 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 SYCE1LA8MT33 242 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 CXCR6O00574 342 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 AQP9O43315 295 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 KDM1AO60341 852 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 FGF1P05230 155 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 LCKP06239 509 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 UMPSP11172 480 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 PKMP14618 531 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 HOXD9P28356 352 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 NEK2P51955 445 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 TRIM32Q13049 653 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 OXA1LQ15070 435 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 PHKG1Q16816 387 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 SYT16Q17RD7 645 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 C1QTNF12Q5T7M4 302 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 CES5AQ6NT32 575 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 FRA10AC1Q70Z53 315 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF551Q7Z340 670 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 PROSER1Q86XN7 944 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF555Q8NEP9 628 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 PSMA8Q8TAA3 256 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC13A3Q8WWT9 602 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 TADA1Q96BN2 335 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 NRBF2Q96F24 287 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 ASB2Q96Q27 587 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 TRIB3Q96RU7 358 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 GPN2Q9H9Y4 310 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 SYTL2Q9HCH5 934 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 TMEM9Q9P0T7 183 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 SNX5Q9Y5X3 404 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 TDRD15B5MCY1 1934 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 TNPO2O14787 897 aaKnown RBP10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 NBNO60934 754 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 JUNBP17275 347 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 GKP32189 559 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 CASP9P55211 416 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 IL2P60568 153 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 MVKQ03426 396 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 SF1Q15637 639 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms