RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MAPKAPK3Q16644 382 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 SMU1Q2TAY7 513 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 PLA2G4EQ3MJ16 856 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 EGFLAMQ63HQ2 1017 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 SBSNQ6UWP8 590 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ADAMTSL2Q86TH1 951 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 IGFN1Q86VF2 1251 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ANKRD13BQ86YJ7 626 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ADHFE1Q8IWW8 467 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 RNF168Q8IYW5 571 aaPredicted RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 CARNMT1Q8N4J0 409 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 B3GALT6Q96L58 329 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ADGRE3Q9BY15 652 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 P2RY12Q9H244 342 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 IPPKQ9H8X2 491 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ZMYM5Q9UJ78 669 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ENPP5Q9UJA9 477 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 AGO1Q9UL18 857 aaKnown RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 PAIP2BQ9ULR5 123 aaKnown RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 AP3M1Q9Y2T2 418 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 NAALAD2Q9Y3Q0 740 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 PCDHGC4Q9Y5F7 938 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 SNX5Q9Y5X3 404 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ZFP37Q9Y6Q3 630 aaPredicted RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 TMEM221A6NGB7 291 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 CXCR6O00574 342 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 RGS14O43566 566 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ACSL4O60488 711 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 PRKD3O94806 890 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 S100BP04271 92 aaPredicted RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 HTR1BP28222 390 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 CDH4P55283 916 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 PIGFQ07326 219 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 TRAF3Q13114 568 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 AQP6Q13520 282 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 LAPTM5Q13571 262 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 CTXN3Q4LDR2 81 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ANKRD34AQ69YU3 496 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 TAS2R42Q7RTR8 314 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 RBM23Q86U06 439 aaKnown RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 STK40Q8N2I9 435 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 GLB1L3Q8NCI6 653 aaPredicted RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 OR5K1Q8NHB7 308 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 FAM162AQ96A26 154 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 RHBDF1Q96CC6 855 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 SH3YL1Q96HL8 342 aaPredicted RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 NODALQ96S42 347 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 NEURL2Q9BR09 285 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 IKZF5Q9H5V7 419 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 NMRK2Q9NPI5 230 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 C3orf18Q9UK00 162 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 UTS2RQ9UKP6 389 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 SLC27A5Q9Y2P5 690 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 GREB1Q4ZG55 1949 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 H3BNC9 293 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 FFAR2O15552 330 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 TLR5O60602 858 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 IL6P05231 212 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 AGXTP21549 392 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 PCMT1P22061 227 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 CCND3P30281 292 aaPredicted RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 RPL38P63173 70 aaKnown RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 NKX3-2P78367 333 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 MAD2L1Q13257 205 aaPredicted RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 ZNF846Q147U1 533 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 PTGR1Q14914 329 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 FAM174BQ3ZCQ3 159 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 RUNDC3AQ59EK9 446 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 ZNF691Q5VV52 312 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 CCSAPQ6IQ19 270 aaPredicted RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 MSRB3Q8IXL7 192 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 EID3Q8N140 333 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 TTC30BQ8N4P2 665 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 EFHBQ8N7U6 833 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 LINC01599Q8WXQ3 324 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 DGCR6LQ9BY27 220 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 MAGIXQ9H6Y5 334 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 DCAF13Q9NV06 445 aaKnown RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 SLC25A37Q9NYZ2 338 aa12.07□□□□□ -0.48
NPC1-202ENST00000540608 FNDC3AQ9Y2H6 1198 aaKnown RBP12.07□□□□□ -0.48
NPC1-202ENST00000540608 CLDN25C9JDP6 229 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 SYN3O14994 580 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 RAD51BO15315 384 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 SLC16A6O15403 523 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 UGT2B11O75310 529 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 UGT2B4P06133 528 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 RETP07949 1114 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 ZDHHC11BP0C7U3 371 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 CDH3P22223 829 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 RYKP34925 604 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 DCTP40126 519 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 OPRL1P41146 370 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 FLT3LGP49771 235 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 ARPP19P56211 112 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 IL18R1Q13478 541 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 PON2Q15165 354 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 FAM26DQ5JW98 314 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 SPESP1Q6UW49 350 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 GPR149Q86SP6 731 aa12.06□□□□□ -0.48
NPC1-202ENST00000540608 PARP8Q8N3A8 854 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms