RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 CCNYL3P0C7X3 344 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 SLC6A4P31645 630 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 MAGEA3P43357 314 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 SKIV2LQ15477 1246 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 NFE2Q16621 373 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 DCLRE1AQ6PJP8 1040 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 SPESP1Q6UW49 350 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 DLK2Q6UY11 383 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ARHGAP36Q6ZRI8 547 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 VASH1Q7L8A9 365 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 KDELC2Q7Z4H8 507 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 GJD3Q8N144 294 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 NATD1Q8N6N6 113 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 OR2T34Q8NGX1 318 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 OR2T3Q8NH03 318 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF431Q8TF32 576 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 RNF139Q8WU17 664 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PTCD2Q8WV60 388 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 FATE1Q969F0 183 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 GAL3ST3Q96A11 431 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TMIGD2Q96BF3 282 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF668Q96K58 619 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 EBNA1BP2Q99848 306 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 OSBPL2Q9H1P3 480 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 UPB1Q9UBR1 384 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 REV1Q9UBZ9 1251 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 MOXD2PA6NHM9 499 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 TREHO43280 583 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 RGS10O43665 173 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 AVILO75366 819 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 SCELO95171 688 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 IL7P13232 177 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 AOC1P19801 751 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 RBM34P42696 430 aaKnown RBP5.96□□□□□ -1.45
PTPRD-214ENST00000540109 PITPNAQ00169 270 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 TUSC3Q13454 348 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 HNRNPDQ14103 355 aaKnown RBP5.96□□□□□ -1.45
PTPRD-214ENST00000540109 STARD3Q14849 445 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 TLR1Q15399 786 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 PPP1R3AQ16821 1122 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 TXNRD3NBQ6F5E7 133 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 RALGPS2Q86X27 583 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-214ENST00000540109 SLC15A3Q8IY34 581 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 ZZZ3Q8IYH5 903 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 DEFB106AQ8N104 65 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 FAM109AQ8N4B1 249 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 FBXO30Q8TB52 745 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 GATA6Q92908 595 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 MIPEPQ99797 713 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 ADI1Q9BV57 179 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 CSNK1G1Q9HCP0 422 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 PRMT8Q9NR22 394 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-214ENST00000540109 PNPOQ9NVS9 261 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 FAM50BQ9Y247 325 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 TNPO3Q9Y5L0 923 aaKnown RBP5.96□□□□□ -1.45
PTPRD-214ENST00000540109 MYL12BO14950 172 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 TYROBPO43914 113 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 NUAK1O60285 661 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 MAP3K6O95382 1288 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 MT-ND1P03886 318 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 TP53P04637 393 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-214ENST00000540109 LCP1P13796 627 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 TCF3P15923 654 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 XRCC1P18887 633 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-214ENST00000540109 CYP2B6P20813 491 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 GTF2E2P29084 291 aaKnown RBP5.96□□□□□ -1.45
PTPRD-214ENST00000540109 GMPRP36959 345 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 CAPZA1P52907 286 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 DAOAP59103 153 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 PAMR1Q6UXH9 720 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 RNF180Q86T96 592 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 ATPAF2Q8N5M1 289 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 KDM1BQ8NB78 822 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 ITFG1Q8TB96 612 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 ING5Q8WYH8 240 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 DIRAS2Q96HU8 199 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 FUBP3Q96I24 572 aaKnown RBP eCLIP5.96□□□□□ -1.45
PTPRD-214ENST00000540109 GAL3ST1Q99999 423 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 CATSPERBQ9H7T0 1116 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 FOLH1BQ9HBA9 442 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 GPSM3Q9Y4H4 160 aa5.96□□□□□ -1.45
PTPRD-214ENST00000540109 M0QZQ0 153 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 MEN1O00255 615 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 LTFP02788 710 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 NR2F6P10588 404 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 GEMP55040 296 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 TPI1P60174 286 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 MERTKQ12866 999 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 GALNT3Q14435 633 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 CLCA4Q14CN2 919 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 BANPQ8N9N5 519 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 NRG4Q8WWG1 115 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 TCEAL3Q969E4 200 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 CCDC74BQ96LY2 380 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 GAD1Q99259 594 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 UCK2Q9BZX2 261 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 NMRAL1Q9HBL8 299 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 SARS2Q9NP81 518 aaKnown RBP5.96□□□□□ -1.46
PTPRD-214ENST00000540109 TBC1D13Q9NVG8 400 aa5.96□□□□□ -1.46
PTPRD-214ENST00000540109 EXD2Q9NVH0 621 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms