RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CD180Q99467 661 aa15.24■□□□□ 0.03
CIT-210ENST00000539413 TRIM56Q9BRZ2 755 aaKnown RBP15.24■□□□□ 0.03
CIT-210ENST00000539413 ZPBPQ9BS86 351 aa15.24■□□□□ 0.03
CIT-210ENST00000539413 DDX47Q9H0S4 455 aaKnown RBP15.24■□□□□ 0.03
CIT-210ENST00000539413 SRMSQ9H3Y6 488 aa15.24■□□□□ 0.03
CIT-210ENST00000539413 MVB12BQ9H7P6 319 aa15.24■□□□□ 0.03
CIT-210ENST00000539413 SEMA5BQ9P283 1151 aa15.24■□□□□ 0.03
CIT-210ENST00000539413 PILRAQ9UKJ1 303 aa15.24■□□□□ 0.03
CIT-210ENST00000539413 UBA6A0AVT1 1052 aaPredicted RBP15.23■□□□□ 0.03
CIT-210ENST00000539413 TLCD2A6NGC4 264 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 GOLGA8KD6RF30 607 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 GOLGA8TH3BQL2 631 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 PRMT5O14744 637 aaPredicted RBP15.23■□□□□ 0.03
CIT-210ENST00000539413 STK17BO94768 372 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 MLNP12872 115 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 ACADLP28330 430 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 ATP1A2P50993 1020 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 KPNA2P52292 529 aaKnown RBP15.23■□□□□ 0.03
CIT-210ENST00000539413 KCNAB1Q14722 419 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 KIAA1614Q5VZ46 1190 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 FBXO38Q6PIJ6 1188 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 TIPARPQ7Z3E1 657 aaKnown RBP15.23■□□□□ 0.03
CIT-210ENST00000539413 CACNA2D3Q8IZS8 1091 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 KRT222Q8N1A0 295 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 OTUD6BQ8N6M0 293 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 IL22RA1Q8N6P7 574 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 NAT8LQ8N9F0 302 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 SIDT2Q8NBJ9 832 aaKnown RBP15.23■□□□□ 0.03
CIT-210ENST00000539413 MCUQ8NE86 351 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 OR5AR1Q8NGP9 310 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 ELMO2Q96JJ3 720 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 SLC41A2Q96JW4 573 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 CAPZA3Q96KX2 299 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 PPM1MQ96MI6 270 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 SERPINB12Q96P63 405 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 CARD6Q9BX69 1037 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 P2RY12Q9H244 342 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 TFB2MQ9H5Q4 396 aaKnown RBP15.23■□□□□ 0.03
CIT-210ENST00000539413 XKR8Q9H6D3 395 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 CDYLQ9Y232 598 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 ASF1AQ9Y294 204 aa15.23■□□□□ 0.03
CIT-210ENST00000539413 TMEM184BQ9Y519 407 aaPredicted RBP15.23■□□□□ 0.03
CIT-210ENST00000539413 SDK2Q58EX2 2172 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 F8W8V4 182 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 BTN3A3O00478 584 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 BTN3A1O00481 513 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 NDUFS3O75489 264 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 EBLN1P0CF75 366 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 FOLR1P15328 257 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 ZNF28P17035 718 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 HSPA14Q0VDF9 509 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 PRKAA1Q13131 559 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 PPP1R7Q15435 360 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 PAPD7Q5XG87 772 aaKnown RBP15.22■□□□□ 0.03
CIT-210ENST00000539413 PTRHD1Q6GMV3 140 aaKnown RBP15.22■□□□□ 0.03
CIT-210ENST00000539413 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
CIT-210ENST00000539413 CASC4Q6P4E1 433 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 PCSK4Q6UW60 755 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 VRK3Q8IV63 474 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 TSSK1BQ9BXA7 367 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 XAB2Q9HCS7 855 aaKnown RBP15.22■□□□□ 0.03
CIT-210ENST00000539413 ICKQ9UPZ9 632 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 PCDHGA4Q9Y5G9 962 aa15.22■□□□□ 0.03
CIT-210ENST00000539413 LOC400499M0QZD8 3231 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 GSAPA4D1B5 854 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 SDR42E2A6NKP2 422 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 GPC4O75487 556 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 DLGAP3O95886 979 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 TPBGLP0DKB5 382 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 FGF5P12034 268 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 LIFP15018 202 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 ARL4DP49703 201 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 EIF3BP55884 814 aaKnown RBP15.21■□□□□ 0.03
CIT-210ENST00000539413 RHDQ02161 417 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 PLOD1Q02809 727 aaPredicted RBP15.21■□□□□ 0.03
CIT-210ENST00000539413 IL11RAQ14626 422 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 TYSND1Q2T9J0 566 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 RNASEH2BQ5TBB1 312 aaKnown RBP15.21■□□□□ 0.03
CIT-210ENST00000539413 MRNIPQ6NTE8 343 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 AMIGO1Q86WK6 493 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 KMT5CQ86Y97 462 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 CREG2Q8IUH2 290 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 RASGRP3Q8IV61 690 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 TBC1D21Q8IYX1 336 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 SLC22A15Q8IZD6 547 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 NLGN4XQ8N0W4 816 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 AGGF1Q8N302 714 aaeCLIP15.21■□□□□ 0.03
CIT-210ENST00000539413 NLGN4YQ8NFZ3 816 aaPredicted RBP15.21■□□□□ 0.03
CIT-210ENST00000539413 ZNF669Q96BR6 464 aaPredicted RBP15.21■□□□□ 0.03
CIT-210ENST00000539413 NAPGQ99747 312 aaPredicted RBP15.21■□□□□ 0.03
CIT-210ENST00000539413 ULBP3Q9BZM4 244 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 TRIT1Q9H3H1 467 aaKnown RBP15.21■□□□□ 0.03
CIT-210ENST00000539413 IL1RAPL1Q9NZN1 696 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 SAMD15Q9P1V8 674 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 GNPTGQ9UJJ9 305 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 POMT2Q9UKY4 750 aa15.21■□□□□ 0.03
CIT-210ENST00000539413 FAM237BA0A1B0GVD1 139 aa15.2■□□□□ 0.02
CIT-210ENST00000539413 MATN2O00339 956 aa15.2■□□□□ 0.02
CIT-210ENST00000539413 ATXN7O15265 892 aaPredicted RBP15.2■□□□□ 0.02
CIT-210ENST00000539413 FANCGO15287 622 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms