RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 NAT8LQ8N9F0 302 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 OR5K2Q8NHB8 316 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 ELMO1Q92556 727 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 NKD1Q969G9 470 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 SERPINB12Q96P63 405 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 TGM7Q96PF1 710 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 NAPGQ99747 312 aaPredicted RBP11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 CHRNA10Q9GZZ6 450 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 P2RY12Q9H244 342 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 LATS2Q9NRM7 1088 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 HRASLS2Q9NWW9 162 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 SAMD15Q9P1V8 674 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 GNPTGQ9UJJ9 305 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 PILRAQ9UKJ1 303 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 POMT2Q9UKY4 750 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 BTRCQ9Y297 605 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 SAR1BQ9Y6B6 198 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 PRSS21Q9Y6M0 314 aa11.98□□□□□ -0.49
CLTCL1-205ENST00000538828 COL6A6A6NMZ7 2263 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 TCRBV7S3A2A0A539 114 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 A8MU76 341 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 CCDC188H7C350 402 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 ERVH48-1M5A8F1 160 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 NDC80O14777 642 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 NDUFS3O75489 264 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 RASSF9O75901 435 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 USP1O94782 785 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 TMEM63AO94886 807 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 ZBTB11O95625 1053 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 DLGAP3O95886 979 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 ESR1P03372 595 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 MT-ND3P03897 115 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 RPN2P04844 631 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 APOA4P06727 396 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 MGAT1P26572 445 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 NMBRP28336 390 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 PDHA2P29803 388 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 ATP5DP30049 168 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 SHMT2P34897 504 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 LEPRP48357 1165 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 ARCN1P48444 511 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 GNG11P61952 73 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 HSD11B2P80365 405 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 ABHD18Q0P651 414 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 CBLBQ13191 982 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 PTK6Q13882 451 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 DNTTIP2Q5QJE6 756 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 SNAP47Q5SQN1 464 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 MANEAQ5SRI9 462 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 PLEKHS1Q5SXH7 462 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 ANKS6Q68DC2 871 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 ARMC6Q6NXE6 501 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 IRGCQ6NXR0 463 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 CREG2Q8IUH2 290 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 LCN9Q8WX39 176 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 MFSD3Q96ES6 412 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 NAF1Q96HR8 494 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 FERD3LQ96RJ6 166 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 NAT9Q9BTE0 207 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 PITPNM3Q9BZ71 974 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 SRMSQ9H3Y6 488 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 PDE7BQ9NP56 450 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 INTS10Q9NVR2 710 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 SYBUQ9NX95 663 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 OR6C2Q9NZP2 312 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 KLHL42Q9P2K6 505 aa11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 CFAP20Q9Y6A4 193 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-205ENST00000538828 LOC400499M0QZD8 3231 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 UBA6A0AVT1 1052 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 CCDC78A2IDD5 438 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 CTAGE9A4FU28 777 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 BHMG1C9JSJ3 638 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 ATXN7O15265 892 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 OR1I1O60431 355 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 VAPBO95292 243 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 FKBP9O95302 570 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 TTC4O95801 387 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 RECKO95980 971 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 ITGB2P05107 769 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 AOAHP28039 575 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 CCR7P32248 378 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 CXADRP78310 365 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 CRADDP78560 199 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 SEMA3AQ14563 771 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 TMED2Q15363 201 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 TRIP13Q15645 432 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 RNASEH2BQ5TBB1 312 aaKnown RBP11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 UNC5DQ6UXZ4 953 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 AMIGO1Q86WK6 493 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 ZFAND4Q86XD8 727 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 PPP1R3BQ86XI6 285 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 NLGN4XQ8N0W4 816 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 ESX1Q8N693 406 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 ZSCAN1Q8NBB4 408 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 SIDT2Q8NBJ9 832 aaKnown RBP11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 PHC3Q8NDX5 983 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 NLGN4YQ8NFZ3 816 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 OR52E1Q8NGJ3 308 aa11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 GABPB2Q8TAK5 448 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-205ENST00000538828 CALML6Q8TD86 181 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms