RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ZFPM2Q8WW38 1151 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 HDAC10Q969S8 669 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 ZNF778Q96MU6 729 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 EFHD1Q9BUP0 239 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 KCNF1Q9H3M0 494 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 PDE7BQ9NP56 450 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 SOHLH2Q9NX45 425 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 RARRES3Q9UL19 164 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 IFRD1O00458 451 aaPredicted RBP14.55□□□□□ -0.08
RAB40B-202ENST00000538809 BTN3A1O00481 513 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 SLC28A2O43868 658 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 GOT2P00505 430 aaKnown RBP14.55□□□□□ -0.08
RAB40B-202ENST00000538809 APRTP07741 180 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 ITGB6P18564 788 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 CDH3P22223 829 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 ADRA1DP25100 572 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 POLE2P56282 527 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 PRKAA1Q13131 559 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 BOP1Q14137 746 aaKnown RBP14.55□□□□□ -0.08
RAB40B-202ENST00000538809 ITIH4Q14624 930 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 PWWP2BQ6NUJ5 590 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 CYB5D1Q6P9G0 228 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 AFTPHQ6ULP2 937 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 C4orf22Q6V702 233 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 PACS1Q6VY07 963 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 KMT5CQ86Y97 462 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 D2HGDHQ8N465 521 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 OR52E1Q8NGJ3 308 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 LCN9Q8WX39 176 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 ELMO1Q92556 727 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 PEX13Q92968 403 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.55□□□□□ -0.08
RAB40B-202ENST00000538809 SRMSQ9H3Y6 488 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 XKR8Q9H6D3 395 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 FGF21Q9NSA1 209 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 POMT2Q9UKY4 750 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 JRKLQ9Y4A0 524 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 TCAF1Q9Y4C2 921 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 SEC16AO15027 2179 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 MED13Q9UHV7 2174 aa14.55□□□□□ -0.08
RAB40B-202ENST00000538809 GOLGA6L3A6NEY3 463 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 BTN3A3O00478 584 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 OR1I1O60431 355 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 KATNA1O75449 491 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 AP2A2O94973 939 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 ZBTB11O95625 1053 aaPredicted RBP14.54□□□□□ -0.08
RAB40B-202ENST00000538809 FTH1P02794 183 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 TCN2P20062 427 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 NSG1P42857 185 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 HSD11B2P80365 405 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 BASP1P80723 227 aaKnown RBP14.54□□□□□ -0.08
RAB40B-202ENST00000538809 ACY1Q03154 408 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 PRKG2Q13237 762 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 SEMA3AQ14563 771 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 DEFB109BQ30KR1 87 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 SYTL3Q4VX76 610 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 ZNF449Q6P9G9 518 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 ZNF534Q76KX8 674 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 OR5AR1Q8NGP9 310 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 CT55Q8WUE5 264 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 SGSM3Q96HU1 749 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 FAM117AQ9C073 453 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 STARD5Q9NSY2 213 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 TTC7AQ9ULT0 858 aaPredicted RBP14.54□□□□□ -0.08
RAB40B-202ENST00000538809 HEMK1Q9Y5R4 338 aaPredicted RBP14.54□□□□□ -0.08
RAB40B-202ENST00000538809 PCM1Q15154 2024 aa14.54□□□□□ -0.08
RAB40B-202ENST00000538809 TENM4Q6N022 2769 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 SLC9B1P1A6NJY1 282 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 J3QKU1 62 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 TERTO14746 1132 aaKnown RBP14.53□□□□□ -0.08
RAB40B-202ENST00000538809 NTRK1P04629 796 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 GSTM1P09488 218 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 PVRP15151 417 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 CCR10P46092 362 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 CD151P48509 253 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 CSE1LP55060 971 aaKnown RBP14.53□□□□□ -0.08
RAB40B-202ENST00000538809 SESN2P58004 480 aaPredicted RBP14.53□□□□□ -0.08
RAB40B-202ENST00000538809 PRAMEP78395 509 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 CRADDP78560 199 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 GSTM4Q03013 218 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 RPA4Q13156 261 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 KCNAB2Q13303 367 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 DNASE1L3Q13609 305 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 LAMB3Q13751 1172 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 TTC27Q6P3X3 843 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 NLRP9Q7RTR0 991 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 PPHLN1Q8NEY8 458 aaKnown RBP14.53□□□□□ -0.08
RAB40B-202ENST00000538809 OR6P1Q8NGX9 317 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 LKAAEAR1Q8TD35 194 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 TFGQ92734 400 aaPredicted RBP14.53□□□□□ -0.08
RAB40B-202ENST00000538809 CATSPER2Q96P56 530 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 RUFY1Q96T51 708 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 TRIM4Q9C037 500 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 KLHL25Q9H0H3 589 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 MVB12BQ9H7P6 319 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 HOMER3Q9NSC5 361 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 GEMIN8Q9NWZ8 242 aaKnown RBP14.53□□□□□ -0.08
RAB40B-202ENST00000538809 ICKQ9UPZ9 632 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 BTRCQ9Y297 605 aa14.53□□□□□ -0.08
RAB40B-202ENST00000538809 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms