RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 GPR21Q99679 349 aa13.67□□□□□ -0.22
VPS11-205ENST00000534551 AARSD1Q9BTE6 412 aaKnown RBP13.67□□□□□ -0.22
VPS11-205ENST00000534551 NFS1Q9Y697 457 aa13.67□□□□□ -0.22
VPS11-205ENST00000534551 CHD8Q9HCK8 2581 aa13.67□□□□□ -0.22
VPS11-205ENST00000534551 IGF2RP11717 2491 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 IGHV5-10-1A0A0J9YXX1 117 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 KLHL33A6NCF5 533 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 IFRD1O00458 451 aaPredicted RBP13.66□□□□□ -0.22
VPS11-205ENST00000534551 EIF3HO15372 352 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS11-205ENST00000534551 GPC4O75487 556 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 TCEA3O75764 348 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 UBXN7O94888 489 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 MPOP05164 745 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 PROS1P07225 676 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 GSTM1P09488 218 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 CDK4P11802 303 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 MAGEA4P43358 317 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 CAPZBP47756 277 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 LEPRP48357 1165 aaKnown RBP13.66□□□□□ -0.22
VPS11-205ENST00000534551 CLCN7P51798 805 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 INHBCP55103 352 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 ADARP55265 1226 aaKnown RBP13.66□□□□□ -0.22
VPS11-205ENST00000534551 CDKN2DP55273 166 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 TIAL1Q01085 375 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS11-205ENST00000534551 GSTM4Q03013 218 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 CAV1Q03135 178 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 MGAT5Q09328 741 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 RPA4Q13156 261 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 CBLBQ13191 982 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 C16orf72Q14CZ0 275 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 FOXR1Q6PIV2 292 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 OTOAQ7RTW8 1153 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 ZBTB2Q8N680 514 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 OR52E1Q8NGJ3 308 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 NCSTNQ92542 709 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 TFGQ92734 400 aaPredicted RBP13.66□□□□□ -0.22
VPS11-205ENST00000534551 AHCYL2Q96HN2 611 aaKnown RBP13.66□□□□□ -0.22
VPS11-205ENST00000534551 TGM7Q96PF1 710 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 PANX3Q96QZ0 392 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 TSSK1BQ9BXA7 367 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 XKR8Q9H6D3 395 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 KIR3DX1Q9H7L2 352 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 FAM114A2Q9NRY5 505 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 MOCS1Q9NZB8 636 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 SLC24A2Q9UI40 661 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 SATB2Q9UPW6 733 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 ASF1AQ9Y294 204 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 MSRB2Q9Y3D2 182 aa13.66□□□□□ -0.22
VPS11-205ENST00000534551 A8MU76 341 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 E5RI56 91 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 AHSGP02765 367 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 APOA4P06727 396 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 TPBGLP0DKB5 382 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 THRAP10827 490 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 CHRM3P20309 590 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 CD151P48509 253 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 EPHA4P54764 986 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 GPLD1P80108 840 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 ABRQ12979 859 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 GBX1Q14549 363 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 ZNF460Q14592 562 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 TMED2Q15363 201 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 CCSMST1Q4G0I0 132 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 PALM2Q8IXS6 379 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 LMNTD2Q8IXW0 634 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 GPATCH11Q8N954 259 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 AVL9Q8NBF6 648 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 MDM1Q8TC05 714 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 CD200R1Q8TD46 325 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 SH3KBP1Q96B97 665 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 RNF31Q96EP0 1072 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 PPM1MQ96MI6 270 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 OLFM1Q99784 485 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 PHACTR1Q9C0D0 580 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 CCDC68Q9H2F9 335 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 UCK1Q9HA47 277 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 LRRC4CQ9HCJ2 640 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 NINJ2Q9NZG7 142 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 ZFATQ9P243 1243 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 NFU1Q9UMS0 254 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 ICKQ9UPZ9 632 aa13.65□□□□□ -0.22
VPS11-205ENST00000534551 TDRKHQ9Y2W6 561 aaKnown RBP13.65□□□□□ -0.22
VPS11-205ENST00000534551 MN1Q10571 1320 aaPredicted RBP13.64□□□□□ -0.23
VPS11-205ENST00000534551 FAM221BA6H8Z2 402 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 TRABD2BA6NFA1 517 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 F8W8V4 182 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 PFDN6O15212 129 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 KIF1CO43896 1103 aaKnown RBP13.64□□□□□ -0.23
VPS11-205ENST00000534551 SLCO2B1O94956 709 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 AMD1P17707 334 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 ITIH1P19827 911 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 CCKBRP32239 447 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 ETV5P41161 510 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 GABREP78334 506 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 ZFP36L1Q07352 338 aaKnown RBP13.64□□□□□ -0.23
VPS11-205ENST00000534551 FRG1Q14331 258 aaKnown RBP13.64□□□□□ -0.23
VPS11-205ENST00000534551 KRT33BQ14525 404 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 GLE1Q53GS7 698 aaKnown RBP13.64□□□□□ -0.23
VPS11-205ENST00000534551 IRGCQ6NXR0 463 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 240.5 ms