RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SMC3Q9UQE7 1217 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 EXOC6BQ9Y2D4 811 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 KCTD3Q9Y597 815 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 SLC4A4Q9Y6R1 1079 aa4.22□□□□□ -1.73
AC055878.1-201ENST00000531858 TRBV5-7A0A0A0MS05 114 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 A0A1B0GTL3 188 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 FAM90A10PA6NDY2 464 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 TMEM221A6NGB7 291 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 FLRT2O43155 660 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 AP5Z1O43299 807 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ZNF202O95125 648 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SPDEFO95238 335 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 CXCL14O95715 111 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 TOP3BO95985 862 aaKnown RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SBK2P0C263 348 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 OR2T7P0C7T2 308 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 TFPIP10646 304 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ENO3P13929 434 aaPredicted RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 CYP11B2P19099 503 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ITGA3P26006 1051 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 NMBRP28336 390 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 TACR3P29371 465 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 TNNT2P45379 298 aaPredicted RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SLURP1P55000 103 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 HNRNPKP61978 463 aaKnown RBP eCLIP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SPIBQ01892 262 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 PPP1R8Q12972 351 aaKnown RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 IFT88Q13099 833 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 CRHR2Q13324 411 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SNX1Q13596 522 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 KPNB1Q14974 876 aaKnown RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 KARSQ15046 597 aaKnown RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 C2orf68Q2NKX9 166 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ALG10Q5BKT4 473 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ALG10BQ5I7T1 473 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ABHD17BQ5VST6 288 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 FRG2Q64ET8 278 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 OR6B2Q6IFH4 312 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 LCN10Q6JVE6 187 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 PODNL1Q6PEZ8 512 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 FIGLAQ6QHK4 219 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 B3GLCTQ6Y288 498 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ARMCX2Q7L311 632 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 NRARPQ7Z6K4 114 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ZNF573Q86YE8 665 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ZCCHC7Q8N3Z6 543 aaKnown RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SPATA6LQ8N4H0 392 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SLC38A9Q8NBW4 561 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 FAM71CQ8NEG0 241 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SLC20A1Q8WUM9 679 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SLC9A6Q92581 669 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 GNRHR2Q96P88 292 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 PCDHB18PQ96TA0 734 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SPAG8Q99932 426 aaPredicted RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ZNF577Q9BSK1 485 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 SCNM1Q9BWG6 230 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 CARD9Q9H257 536 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 UBQLN3Q9H347 655 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ZNF304Q9HCX3 659 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 GPR108Q9NPR9 543 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 FARSBQ9NSD9 589 aaKnown RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ACSS1Q9NUB1 689 aaPredicted RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 TMEM184CQ9NVA4 438 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ASIC5Q9NY37 505 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 CLIP2Q9UDT6 1046 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 FAM153AQ9UHL3 310 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ABT1Q9ULW3 272 aaKnown RBP4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 KCNK6Q9Y257 313 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 ASB3Q9Y575 518 aa4.21□□□□□ -1.74
AC055878.1-201ENST00000531858 NSD2O96028 1365 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 MAGEA13PA6NCF6 341 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 TRIM49BA6NDI0 452 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 DDTLA6NHG4 134 aaPredicted RBP4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 ETV2O00321 342 aaPredicted RBP4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 PLK4O00444 970 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 CTDSPLO15194 276 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 MAGEB2O15479 319 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 ZNF821O75541 412 aaPredicted RBP4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 SCGB2A1O75556 95 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 GCATO75600 419 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 MFN2O95140 757 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 PLGP00747 810 aaPredicted RBP4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 LCATP04180 440 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 CSN3P07498 182 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 PSMA5P28066 241 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 TKTP29401 623 aaKnown RBP4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 SRP54P61011 504 aaKnown RBP4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 SSTP61278 116 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 IRX4P78413 519 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 PPP2R2BQ00005 443 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 BEX3Q00994 111 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 GCNT1Q02742 428 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 OVGP1Q12889 678 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 IL24Q13007 206 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 SPP2Q13103 211 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 SYT16Q17RD7 645 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 CFAP157Q5JU67 520 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 TTC39AQ5SRH9 613 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 C6orf10Q5SRN2 563 aa4.2□□□□□ -1.74
AC055878.1-201ENST00000531858 CYP4A22Q5TCH4 519 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms