RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PRSS44E7EML9 344 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 HS3ST1O14792 307 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 GAP43P17677 238 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 CDH2P19022 906 aaPredicted RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 TCF7P36402 384 aaPredicted RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 AKAP17AQ02040 695 aaKnown RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 RELQ04864 619 aaPredicted RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 AIMP1Q12904 312 aaKnown RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 MAD2L1Q13257 205 aaPredicted RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 C2orf76Q3KRA6 126 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 IRAK1BP1Q5VVH5 260 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 C16orf87Q6PH81 154 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 ZER1Q7Z7L7 766 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 RNF113BQ8IZP6 322 aaKnown RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 TMCO5AQ8N6Q1 288 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 RBMXL3Q8N7X1 1067 aaKnown RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 POC1AQ8NBT0 407 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 KCNH5Q8NCM2 988 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 BBS10Q8TAM1 723 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 SCFD2Q8WU76 684 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 ELMOD3Q96FG2 381 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 TMEM237Q96Q45 408 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 C5AR2Q9P296 337 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 LAMP5Q9UJQ1 280 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 RIMS2Q9UQ26 1411 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 MED14O60244 1454 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 PES1O00541 588 aaKnown RBP5.65□□□□□ -1.5
PCF11-202ENST00000528336 ADAM20O43506 726 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 ZBTB14O43829 449 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 TPPPO94811 219 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 MYOD1P15172 320 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 ITGA2P17301 1181 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 MAPK3P27361 379 aaPredicted RBP5.65□□□□□ -1.5
PCF11-202ENST00000528336 ANP32AP39687 249 aaKnown RBP5.65□□□□□ -1.5
PCF11-202ENST00000528336 STARD6P59095 220 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 TAS2R40P59535 323 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 POLR2FP61218 127 aaKnown RBP5.65□□□□□ -1.5
PCF11-202ENST00000528336 ISL1P61371 349 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 PRAMEP78395 509 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 HMGN5P82970 282 aaKnown RBP5.65□□□□□ -1.5
PCF11-202ENST00000528336 TFAP4Q01664 338 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 CRYMQ14894 314 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 DECR1Q16698 335 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 SHROOM1Q2M3G4 852 aaPredicted RBP5.65□□□□□ -1.5
PCF11-202ENST00000528336 HSP90AB3PQ58FF7 597 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 ZNF805Q5CZA5 627 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 C18orf63Q68DL7 685 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 BRAT1Q6PJG6 821 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 SARM1Q6SZW1 724 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 GFRALQ6UXV0 394 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 C18orf65Q6ZTR6 163 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 TUBA1AQ71U36 451 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 GPR180Q86V85 440 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 NR2C2APQ86WQ0 139 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 TAGAPQ8N103 731 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 OR1J2Q8NGS2 313 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 OR5R1Q8NH85 324 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 HM13Q8TCT9 377 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 DEPDC1BQ8WUY9 529 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 SECTM1Q8WVN6 248 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 CDCA5Q96FF9 252 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 SMC6Q96SB8 1091 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 SEPT5Q99719 369 aaPredicted RBP5.65□□□□□ -1.5
PCF11-202ENST00000528336 TUBA1CQ9BQE3 449 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 LIN28AQ9H9Z2 209 aaKnown RBP5.65□□□□□ -1.5
PCF11-202ENST00000528336 FANCFQ9NPI8 374 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 EXTL2Q9UBQ6 330 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 STK39Q9UEW8 545 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 FBXL5Q9UKA1 691 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 FBXL2Q9UKC9 423 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 POU2F3Q9UKI9 436 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 PADI3Q9ULW8 664 aa5.65□□□□□ -1.5
PCF11-202ENST00000528336 CGNL1Q0VF96 1302 aa5.65□□□□□ -1.51
PCF11-202ENST00000528336 NPHP4O75161 1426 aaPredicted RBP5.65□□□□□ -1.51
PCF11-202ENST00000528336 PTGES3LE9PB15 166 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 BOLA2-SMG1P6H3BVE0 249 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 PSMA7O14818 248 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 TXNL1O43396 289 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 BUB3O43684 328 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 BBOX1O75936 387 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 CAMTA2O94983 1202 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 ICAM1P05362 532 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 TMEM11P17152 192 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 IL4RP24394 825 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 MCM3P25205 808 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 EIF2DP41214 584 aaKnown RBP5.64□□□□□ -1.51
PCF11-202ENST00000528336 PRPHP41219 470 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 APOBEC1P41238 236 aaKnown RBP5.64□□□□□ -1.51
PCF11-202ENST00000528336 GPC3P51654 580 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 MRPS34P82930 218 aaKnown RBP5.64□□□□□ -1.51
PCF11-202ENST00000528336 C17orf67Q0P5P2 114 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 MRPL28Q13084 256 aaKnown RBP5.64□□□□□ -1.51
PCF11-202ENST00000528336 PRPF4BQ13523 1007 aaKnown RBP5.64□□□□□ -1.51
PCF11-202ENST00000528336 HSP90B2PQ58FF3 399 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 PLEKHS1Q5SXH7 462 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 GARNL3Q5VVW2 1013 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 TMEM154Q6P9G4 183 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 CLEC17AQ6ZS10 378 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 TMEM219Q86XT9 240 aa5.64□□□□□ -1.51
PCF11-202ENST00000528336 NRROSQ86YC3 692 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms