RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FAM170AA1A519 330 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 MYBPHLA2RUH7 354 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 GTPBP10A4D1E9 387 aaKnown RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 MTMR11A4FU01 709 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SMTNL1A8MU46 457 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 MCIDASD6RGH6 385 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 TULP2O00295 520 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CLDN5O00501 218 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 PES1O00541 588 aaKnown RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SYN3O14994 580 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 PER2O15055 1255 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 P4HA2O15460 535 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 TEX28O15482 410 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 TBX10O75333 385 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 TACC1O75410 805 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 TADA2AO75478 443 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 BEST1O76090 585 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SEC24AO95486 1093 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 FGFR1OPO95684 399 aaKnown RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CXCL14O95715 111 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CER1O95813 267 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 IGKV3-20P01619 116 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 GYPCP04921 128 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 RB1P06400 928 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ANXA6P08133 673 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ODC1P11926 461 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CCDC130P13994 396 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 UCHL3P15374 230 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 EPCAMP16422 314 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ATF6P18850 670 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CD58P19256 250 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 WARSP23381 471 aaKnown RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 GRK5P34947 590 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 PPM1AP35813 382 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 GLUD2P49448 558 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CLCN4P51793 760 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF132P52740 706 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 NDST1P52848 882 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 AP3M2P53677 418 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 RAD23BP54727 409 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ADPRHP54922 357 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 UBASH3AP57075 661 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 FOXL2P58012 376 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SELENOVP59797 346 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ZP1P60852 638 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 RBP5P82980 135 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ROR1Q01973 937 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 GCNT1Q02742 428 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 UBXN1Q04323 297 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 INCA1Q0VD86 236 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 TRPC3Q13507 836 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CUL2Q13617 745 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SYCP1Q15431 976 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 PSMD5Q16401 504 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 DUSP6Q16828 381 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 EXOC3L4Q17RC7 722 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SGSM1Q2NKQ1 1148 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 USP41Q3LFD5 358 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 TCEAL5Q5H9L2 206 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF667Q5HYK9 610 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 GFI1BQ5VTD9 330 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 DCAF12L2Q5VW00 463 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 FAM171BQ6P995 826 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SARM1Q6SZW1 724 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 DSTYKQ6XUX3 929 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 GBP6Q6ZN66 633 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 IGFN1Q86VF2 1251 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CEP57Q86XR8 500 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 DNAAF5Q86Y56 855 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 KLBQ86Z14 1044 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CAMK1DQ8IU85 385 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 VSTM4Q8IW00 320 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 FAM114A1Q8IWE2 563 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ADGRF2Q8IZF7 708 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 MRPL43Q8N983 215 aaKnown RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 C12orf29Q8N999 325 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 KDM1BQ8NB78 822 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SLC4A11Q8NBS3 891 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ZMIZ2Q8NF64 920 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 WDR60Q8WVS4 1066 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SHC3Q92529 594 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF560Q96MR9 790 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 KLHL5Q96PQ7 755 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 TSPAN18Q96SJ8 248 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CDX2Q99626 313 aaPredicted RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SARGQ9BW04 601 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 NAT10Q9H0A0 1025 aaKnown RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CATSPERBQ9H7T0 1116 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 RMI1Q9H9A7 625 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF556Q9HAH1 456 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 NLRC4Q9NPP4 1024 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CISHQ9NSE2 258 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 FAM207AQ9NSI2 230 aaPredicted RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 DDX43Q9NXZ2 648 aaKnown RBP3.04□□□□□ -1.92
CSDE1-208ENST00000524652 MTRRQ9UBK8 725 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CYTH4Q9UIA0 394 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 DNAJC12Q9UKB3 198 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 GTF3C4Q9UKN8 822 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 CNTN6Q9UQ52 1028 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 LZTS1Q9Y250 596 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms