RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 LINC01565O15544 149 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 XRCC3O43542 346 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 CTSVO60911 334 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 TBX10O75333 385 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 DANCRP0C864 163 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 CETPP11597 493 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 CPT2P23786 658 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 DNASE1P24855 282 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 RAD23AP54725 363 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 CSE1LP55060 971 aaKnown RBP3.6□□□□□ -1.83
PCM1-220ENST00000523896 MBTD1Q05BQ5 628 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 KIR2DS3Q14952 304 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 LETM2Q2VYF4 491 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 ACCSLQ4AC99 568 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 ASPRV1Q53RT3 343 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 RNASEH2BQ5TBB1 312 aaKnown RBP3.6□□□□□ -1.83
PCM1-220ENST00000523896 GFI1BQ5VTD9 330 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 ZNF771Q7L3S4 317 aaPredicted RBP3.6□□□□□ -1.83
PCM1-220ENST00000523896 CUZD1Q86UP6 607 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 FOXP4Q8IVH2 680 aaPredicted RBP3.6□□□□□ -1.83
PCM1-220ENST00000523896 GPALPP1Q8IXQ4 340 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 MAB21L3Q8N8X9 362 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 RADILQ96JH8 1075 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 CFAP57Q96MR6 1250 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 ZNF583Q96ND8 569 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 FNDC11Q9BVV2 318 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 WNT5BQ9H1J7 359 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 OR10A4Q9H209 315 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 NOL11Q9H8H0 719 aaKnown RBP3.6□□□□□ -1.83
PCM1-220ENST00000523896 OSER1Q9NX31 292 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 C5AR2Q9P296 337 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 WDR35Q9P2L0 1181 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 KCNG2Q9UJ96 466 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 CCL27Q9Y4X3 112 aa3.6□□□□□ -1.83
PCM1-220ENST00000523896 KIF21AQ7Z4S6 1674 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 EDDM13A0A1B0GTR0 161 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 TMEM221A6NGB7 291 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 PRR32B1ATL7 298 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 ZNF432O94892 652 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 GGPS1O95749 300 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 OR2T7P0C7T2 308 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 PSMC4P43686 418 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 NR2C2P49116 596 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 DLX5P56178 289 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 HSPB3Q12988 150 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 PRKAA1Q13131 559 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 KRTAP27-1Q3LI81 207 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 ZNF718Q3SXZ3 478 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 FAM198BQ6UWH4 519 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 TMPRSS11FQ6ZWK6 438 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 IQCHQ86VS3 1027 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 CEP57L1Q8IYX8 460 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 MAML2Q8IZL2 1156 aaPredicted RBP3.59□□□□□ -1.83
PCM1-220ENST00000523896 CPSF7Q8N684 471 aaKnown RBP3.59□□□□□ -1.83
PCM1-220ENST00000523896 PPFIBP2Q8ND30 876 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 OR13A1Q8NGR1 328 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 ZFAND2BQ8WV99 257 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 NR4A3Q92570 626 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 SLAMF9Q96A28 289 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 ZNF653Q96CK0 615 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 NXNL1Q96CM4 212 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 RMDN1Q96DB5 314 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 LINC00615Q96LM1 132 aaPredicted RBP3.59□□□□□ -1.83
PCM1-220ENST00000523896 BTBD10Q9BSF8 475 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 LMF2Q9BU23 707 aaKnown RBP3.59□□□□□ -1.83
PCM1-220ENST00000523896 AP1M1Q9BXS5 423 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 ERVMER34-1Q9H9K5 563 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 APOBEC3GQ9HC16 384 aaKnown RBP3.59□□□□□ -1.83
PCM1-220ENST00000523896 TCF7L2Q9NQB0 619 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 PRMT7Q9NVM4 692 aaPredicted RBP3.59□□□□□ -1.83
PCM1-220ENST00000523896 MDFICQ9P1T7 246 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 GIMAP2Q9UG22 337 aa3.59□□□□□ -1.83
PCM1-220ENST00000523896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.59□□□□□ -1.83
PCM1-220ENST00000523896 A0A0B4J293 547 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 A0A1W2PPM1 405 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 H7C0S8 307 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 SPRY1O43609 319 aaPredicted RBP3.58□□□□□ -1.84
PCM1-220ENST00000523896 PRKNO60260 465 aaPredicted RBP3.58□□□□□ -1.84
PCM1-220ENST00000523896 CKMT2P17540 419 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 CBLP22681 906 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 MARK3P27448 753 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 MC5RP33032 325 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 MTHFRP42898 656 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 SLC9A3P48764 834 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 RAB28P51157 221 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 ZNF75DP51815 510 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 THOP1P52888 689 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 DVL1P1P54792 670 aaPredicted RBP3.58□□□□□ -1.84
PCM1-220ENST00000523896 HNRNPKP61978 463 aaKnown RBP eCLIP3.58□□□□□ -1.84
PCM1-220ENST00000523896 ARL16Q0P5N6 197 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 RALGDSQ12967 914 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 PTPRCAPQ14761 206 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 C1orf141Q5JVX7 400 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 CCNYL2Q5T2Q4 361 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 ARMC4Q5T2S8 1044 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 C6orf163Q5TEZ5 329 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 CST9LP1Q5W188 147 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 USP43Q70EL4 1123 aa3.58□□□□□ -1.84
PCM1-220ENST00000523896 CHST3Q7LGC8 479 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms