RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 RARRES3Q9UL19 164 aa18.17■□□□□ 0.5
SPIDR-220ENST00000522900 RIMKLBQ9ULI2 386 aa18.17■□□□□ 0.5
SPIDR-220ENST00000522900 GCN1Q92616 2671 aaKnown RBP18.17■□□□□ 0.5
SPIDR-220ENST00000522900 SLC9B1P1A6NJY1 282 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 BHMG1C9JSJ3 638 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-220ENST00000522900 BTN3A1O00481 513 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 TERTO14746 1132 aaKnown RBP18.16■□□□□ 0.5
SPIDR-220ENST00000522900 NTRK1P04629 796 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 OAS2P29728 719 aaKnown RBP18.16■□□□□ 0.5
SPIDR-220ENST00000522900 DLSTP36957 453 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 SESN2P58004 480 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-220ENST00000522900 CRADDP78560 199 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 NFATC3Q12968 1075 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 LAMB3Q13751 1172 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 ZNF449Q6P9G9 518 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 AFTPHQ6ULP2 937 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 GSTA5Q7RTV2 222 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 LDB1Q86U70 411 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-220ENST00000522900 OR5AR1Q8NGP9 310 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 OR6P1Q8NGX9 317 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 OR4L1Q8NH43 312 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 ELMO1Q92556 727 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 STAMBPL1Q96FJ0 436 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 HGH1Q9BTY7 390 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 TFB2MQ9H5Q4 396 aaKnown RBP18.16■□□□□ 0.5
SPIDR-220ENST00000522900 MVB12BQ9H7P6 319 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 POMT2Q9UKY4 750 aa18.16■□□□□ 0.5
SPIDR-220ENST00000522900 SLC5A10A0PJK1 596 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 GSAPA4D1B5 854 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 LIN7AO14910 233 aaPredicted RBP18.15■□□□□ 0.5
SPIDR-220ENST00000522900 ZBTB11O95625 1053 aaPredicted RBP18.15■□□□□ 0.5
SPIDR-220ENST00000522900 FTH1P02794 183 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 GSTM1P09488 218 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 TPBGLP0DKB5 382 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 ACADLP28330 430 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 PRDX3P30048 256 aaKnown RBP18.15■□□□□ 0.5
SPIDR-220ENST00000522900 NFKB2Q00653 900 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 GSTM4Q03013 218 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 ACY1Q03154 408 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 CDC20Q12834 499 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 PRKAA1Q13131 559 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 LYPLAL1Q5VWZ2 237 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 C16orf46Q6P387 395 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 BORAQ6PGQ7 559 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 ADGRF3Q8IZF5 1079 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 PRELID2Q8N945 189 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 EFHD1Q9BUP0 239 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 KLHL25Q9H0H3 589 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 STARD5Q9NSY2 213 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 MARCH4Q9P2E8 410 aaPredicted RBP18.15■□□□□ 0.5
SPIDR-220ENST00000522900 PADI1Q9ULC6 663 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 ZKSCAN5Q9Y2L8 839 aa18.15■□□□□ 0.5
SPIDR-220ENST00000522900 TCRBV7S3A2A0A539 114 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 KATNA1O75449 491 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 OR56A5P0C7T3 313 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 CCNYL3P0C7X3 344 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 CDH3P22223 829 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 TERF1P54274 439 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 BASP1P80723 227 aaKnown RBP18.14■□□□□ 0.49
SPIDR-220ENST00000522900 TRIP13Q15645 432 aaPredicted RBP18.14■□□□□ 0.49
SPIDR-220ENST00000522900 PCID2Q5JVF3 399 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 PRAMEF17Q5VTA0 474 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 FAM199XQ6PEV8 388 aaPredicted RBP18.14■□□□□ 0.49
SPIDR-220ENST00000522900 NLRP9Q7RTR0 991 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 AMIGO1Q86WK6 493 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 PPHLN1Q8NEY8 458 aaKnown RBP18.14■□□□□ 0.49
SPIDR-220ENST00000522900 LKAAEAR1Q8TD35 194 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 CT55Q8WUE5 264 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 MAIP1Q8WWC4 291 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.14■□□□□ 0.49
SPIDR-220ENST00000522900 ZNF501Q96CX3 271 aaPredicted RBP18.14■□□□□ 0.49
SPIDR-220ENST00000522900 RUFY1Q96T51 708 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 LHX9Q9NQ69 397 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 EIF2B3Q9NR50 452 aaKnown RBP18.14■□□□□ 0.49
SPIDR-220ENST00000522900 C1GALT1Q9NS00 363 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 KCND1Q9NSA2 647 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 GEMIN8Q9NWZ8 242 aaKnown RBP18.14■□□□□ 0.49
SPIDR-220ENST00000522900 SOHLH2Q9NX45 425 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 ICKQ9UPZ9 632 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 BTRCQ9Y297 605 aa18.14■□□□□ 0.49
SPIDR-220ENST00000522900 ZNF462Q96JM2 2506 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 IQCF5A8MTL0 148 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 PYCARD-AS1I3L0S3 204 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 QSOX1O00391 747 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 FURINP09958 794 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 PVRP15151 417 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 ST6GAL1P15907 406 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 TCN2P20062 427 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 NMBRP28336 390 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 CCR7P32248 378 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 CSE1LP55060 971 aaKnown RBP18.13■□□□□ 0.49
SPIDR-220ENST00000522900 POLE2P56282 527 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 TUBB4BP68371 445 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 PRAMEP78395 509 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 TUBB2AQ13885 445 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 DEFB109BQ30KR1 87 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 FASTKD1Q53R41 847 aaKnown RBP18.13■□□□□ 0.49
SPIDR-220ENST00000522900 CYB5D1Q6P9G0 228 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 BPHLQ86WA6 291 aaPredicted RBP18.13■□□□□ 0.49
SPIDR-220ENST00000522900 CARFQ8N187 725 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms