RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 METRNLQ641Q3 311 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 SBSNQ6UWP8 590 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 NAPRTQ6XQN6 538 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 RGS9BPQ6ZS82 235 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 FRA10AC1Q70Z53 315 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 CHST15Q7LFX5 561 aaPredicted RBP12.78□□□□□ -0.36
CPNE3-205ENST00000522240 PDZD3Q86UT5 571 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 PARGQ86W56 976 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 SLC22A9Q8IVM8 553 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 DEFB119Q8N690 84 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 MAGEB18Q96M61 343 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 PAIP2Q9BPZ3 127 aaKnown RBP12.78□□□□□ -0.36
CPNE3-205ENST00000522240 CYP4F12Q9HCS2 524 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 MRPL40Q9NQ50 206 aaKnown RBP12.78□□□□□ -0.36
CPNE3-205ENST00000522240 TRNAU1APQ9NX07 287 aaKnown RBP12.78□□□□□ -0.36
CPNE3-205ENST00000522240 ZSCAN32Q9NX65 697 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 NUDT4Q9NZJ9 180 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 CPSF2Q9P2I0 782 aaKnown RBP12.78□□□□□ -0.36
CPNE3-205ENST00000522240 SLC23A2Q9UGH3 650 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 MOSPD1Q9UJG1 213 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 PRKAB1Q9Y478 270 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 SLCO1B1Q9Y6L6 691 aa12.78□□□□□ -0.36
CPNE3-205ENST00000522240 PRR5-ARHGAP8B1AHC4 643 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 GFYI3L273 518 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 VILLO15195 856 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 KLK8O60259 260 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 SMIM24O75264 130 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.37
CPNE3-205ENST00000522240 WNT1P04628 370 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 TPBGLP0DKB5 382 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 CYP2A7P20853 494 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 ALDH3A1P30838 453 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 NBL1P41271 181 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 DPP6P42658 865 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 PREPP48147 710 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 BLKP51451 505 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 GYS2P54840 703 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 DNAJB13P59910 316 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 IRX4P78413 519 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 CDKL1Q00532 357 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 GUCY1A3Q02108 690 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 EIF2B5Q13144 721 aaKnown RBP12.77□□□□□ -0.37
CPNE3-205ENST00000522240 FZD2Q14332 565 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 TGFBIQ15582 683 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 PLK5Q496M5 336 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 LIPMQ5VYY2 423 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 UNC5DQ6UXZ4 953 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 FAM83HQ6ZRV2 1179 aaPredicted RBP12.77□□□□□ -0.37
CPNE3-205ENST00000522240 TAX1BP1Q86VP1 789 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 GPSM1Q86YR5 675 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 CFAP206Q8IYR0 622 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 RGL4Q8IZJ4 473 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 LILRA3Q8N6C8 439 aaPredicted RBP12.77□□□□□ -0.37
CPNE3-205ENST00000522240 PDPRQ8NCN5 879 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 ZBTB44Q8NCP5 570 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 FBXO15Q8NCQ5 510 aaPredicted RBP12.77□□□□□ -0.37
CPNE3-205ENST00000522240 ASB11Q8WXH4 323 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 SKA1Q96BD8 255 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 ZC3H10Q96K80 434 aaKnown RBP12.77□□□□□ -0.37
CPNE3-205ENST00000522240 FOPNLQ96NB1 174 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 MECRQ9BV79 373 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 SLC12A9Q9BXP2 914 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 CAPS2Q9BXY5 557 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 MIR1-1HGQ9H1L0 117 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 OR52A5Q9H2C5 316 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 TM7SF3Q9NS93 570 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 KLC4Q9NSK0 619 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 FAM8A1Q9UBU6 413 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 SUSD2Q9UGT4 822 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 ADAM21Q9UKJ8 722 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 PCDHGA2Q9Y5H1 932 aa12.77□□□□□ -0.37
CPNE3-205ENST00000522240 THADAQ6YHU6 1953 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 A0A1B0GTW7 788 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 PABPN1LA6NDY0 278 aaKnown RBP12.76□□□□□ -0.37
CPNE3-205ENST00000522240 SRRM3A6NNA2 597 aaPredicted RBP12.76□□□□□ -0.37
CPNE3-205ENST00000522240 A8MT66 165 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 SUPT3HB4E1H0 165 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 TLR4O00206 839 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 KLF11O14901 512 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 BCAT2O15382 392 aaPredicted RBP12.76□□□□□ -0.37
CPNE3-205ENST00000522240 DLX3O60479 287 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 SHOX2O60902 331 aaPredicted RBP12.76□□□□□ -0.37
CPNE3-205ENST00000522240 SUPT3HO75486 399 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 IPO13O94829 963 aaKnown RBP12.76□□□□□ -0.37
CPNE3-205ENST00000522240 TNFP01375 233 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 CATP04040 527 aaKnown RBP12.76□□□□□ -0.37
CPNE3-205ENST00000522240 SLC35G4P0C7Q5 338 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 SP9P0CG40 484 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 MTHFD2P13995 350 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 MAOBP27338 520 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 ACADLP28330 430 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 PDHA2P29803 388 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 HOXD12P35452 270 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 AFF3P51826 1226 aaKnown RBP12.76□□□□□ -0.37
CPNE3-205ENST00000522240 HK3P52790 923 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 AP1S2P56377 157 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 NXPH1P58417 271 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 PPARDQ03181 441 aa12.76□□□□□ -0.37
CPNE3-205ENST00000522240 ANGPT1Q15389 498 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms