RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 VSTM1Q6UX27 236 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 TDRPQ86YL5 185 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 GALNT15Q8N3T1 639 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 METTL21AQ8WXB1 218 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 IFT27Q9BW83 186 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 PDZD7Q9H5P4 517 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 TCF7L1Q9HCS4 588 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 PAK6Q9NQU5 681 aaPredicted RBP11.23□□□□□ -0.61
LAMA4-219ENST00000522006 ARHGEF4Q9NR80 690 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 PTTG2Q9NZH5 202 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 PRMT3O60678 531 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 RNASEH2AO75792 299 aaKnown RBP11.23□□□□□ -0.61
LAMA4-219ENST00000522006 LYPLA2O95372 231 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 CHRM5P08912 532 aaPredicted RBP11.23□□□□□ -0.61
LAMA4-219ENST00000522006 RAP2AP10114 183 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 PRPS2P11908 318 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 ECHS1P30084 290 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 TIE1P35590 1138 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 NDUFV1P49821 464 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 CSTF1Q05048 431 aaKnown RBP11.23□□□□□ -0.61
LAMA4-219ENST00000522006 TNFRSF25Q93038 417 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 NSMCE3Q96MG7 304 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 ZNF347Q96SE7 839 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 BCL9O00512 1426 aa11.23□□□□□ -0.61
LAMA4-219ENST00000522006 PLOD2O00469 737 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 PDPK1O15530 556 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 ZNF208O43345 1280 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 MT-CYBP00156 380 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 WASP42768 502 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 EVX2Q03828 476 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GANABQ14697 944 aaKnown RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GFOD2Q3B7J2 385 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GALNT7Q86SF2 657 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 SLITRK4Q8IW52 837 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 RAB2BQ8WUD1 216 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 TLCD1Q96CP7 247 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GAL3ST1Q99999 423 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 LGR4Q9BXB1 951 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 COMMD3Q9UBI1 195 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 RYKP34925 604 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 IRF9Q00978 393 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 TARDBPQ13148 414 aaKnown RBP eCLIP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 KLF1Q13351 362 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 SLC9B1Q4ZJI4 515 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 KLHL22Q53GT1 634 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 BANPQ8N9N5 519 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 LRRC57Q8N9N7 239 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GRPEL2Q8TAA5 225 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 FAM110BQ8TC76 370 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 DQX1Q8TE96 717 aaKnown RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 JSRP1Q96MG2 331 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 ABCG4Q9H172 646 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 MATN2O00339 956 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 CLDN4O14493 209 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 SERPINA3P01011 423 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 C8GP07360 202 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 ITIH1P19827 911 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 ACVR2AP27037 513 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 OR2B6P58173 313 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 CDKL1Q00532 357 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 ZNF234Q14588 700 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 FAM174BQ3ZCQ3 159 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 FSTL5Q8N475 847 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 LRRC20Q8TCA0 184 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 FCGR1BQ92637 280 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 PMEPA1Q969W9 287 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 C8orf48Q96LL4 319 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 TMEM109Q9BVC6 243 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 POMPQ9Y244 141 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 PCDHGC4Q9Y5F7 938 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 ATF6P18850 670 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 MASP1P48740 699 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 NDST2P52849 883 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 PNLIPRP1P54315 467 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 CPNE9Q8IYJ1 553 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 CERS5Q8N5B7 392 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 ATAD1Q8NBU5 361 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GAL3ST4Q96RP7 486 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 FAM83DQ9H4H8 585 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 POLR3BQ9NW08 1133 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 C1orf109Q9NX04 203 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GRHL1Q9NZI5 618 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 DNAJB9Q9UBS3 223 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 FKBPLQ9UIM3 349 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 CNTN6Q9UQ52 1028 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 SLC35G6P0C7Q6 338 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GNA12Q03113 381 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 PRKD1Q15139 912 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GPR153Q6NV75 609 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 IRF2BP1Q8IU81 584 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 SLC13A3Q8WWT9 602 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 CRELD1Q96HD1 420 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 ZFP3Q96NJ6 502 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 TBX5Q99593 518 aa11.22□□□□□ -0.61
LAMA4-219ENST00000522006 GATA5Q9BWX5 397 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 NUSAP1Q9BXS6 441 aaKnown RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 ZNF282Q9UDV7 671 aaPredicted RBP11.22□□□□□ -0.61
LAMA4-219ENST00000522006 EPHX1P07099 455 aa11.21□□□□□ -0.61
LAMA4-219ENST00000522006 SLURP2P0DP57 97 aa11.21□□□□□ -0.61
LAMA4-219ENST00000522006 SLC1A2P43004 574 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms